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Protein
Submitted name:

Uncharacterized protein

Gene

CCACVL1_08614

Organism
Corchorus capsularis (Jute)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CCACVL1_08614Imported
OrganismiCorchorus capsularis (Jute)Imported
Taxonomic identifieri210143 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeGrewioideaeApeibeaeCorchorus
Proteomesi
  • UP000188268 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 166TIRInterPro annotationAdd BLAST141

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

OMAiMEWISIE

Family and domain databases

Gene3Di3.40.50.10140, 1 hit
3.80.10.10, 4 hits
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR032675 LRR_dom_sf
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR000157 TIR_dom
IPR035897 Toll_tir_struct_dom_sf
PfamiView protein in Pfam
PF00931 NB-ARC, 1 hit
PF01582 TIR, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SM00255 TIR, 1 hit
SUPFAMiSSF52200 SSF52200, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50104 TIR, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1R3IZH0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKRKFSEFSS SPSSSSSSSA PHQWRFKHQI FLSFCGDTRK TFTDHLFNAL
60 70 80 90 100
INKGIETFRD EESLEKGEEL TPALLGAIGE SWASIIVFSK GYASSRWCLK
110 120 130 140 150
ELAEIMKKRK ERGLGVYPIF YDVDPSDLRN QRNSVEEAFK KHETNKKISK
160 170 180 190 200
EEMQSWRRGL GDVPEIIGWD NHKKDQHEAK FLERIVENIT KLISKEYPAE
210 220 230 240 250
SISLLPSKGI IPSKSAELAG GQIMEALKDD GVNIIGLWGM GGVGKTTLVK
260 270 280 290 300
EVGRQAKESK LFAEVVIVTV SQNPNIGKLQ KEIAESLKLT LNNKTDVGRR
310 320 330 340 350
EQLCAALLQK KESILIILDD LWRELDLMEV GILFDELQHK GCKILLTTRF
360 370 380 390 400
ERVCSDMGSG KVVWLDVLDK DEAWQLFKSC AKLDDDASDN ILKMAAEVAK
410 420 430 440 450
ECKGLPIALS SLGNTLKGAR LHKWREAIEN LRHHTLLDMV GVEEDEKNAY
460 470 480 490 500
KCLKLSYDFL RLDNTKKCFL LCSLYPEDHS IPIEELVRHV WGLELFKGRN
510 520 530 540 550
SIQKARDAVY TAVDHLKACS LLLDDDKPWN KNRVKMHDMV RDVALWIGSQ
560 570 580 590 600
KETMMMMNHF VIKSELGAKE WPRSENFEQC TAISFMHCNI KGIPQGLQYP
610 620 630 640 650
KLEFLSFRNF FFHEKKTMMF SGSSFEGMKS LKVLNLVRIK GSLSQDALQM
660 670 680 690 700
LTNLRSLYLE CCEINTYISF SSLGNLKKLE ILSFCDSDIE VLPDEVGELK
710 720 730 740 750
SLRLLDLSWC ERLKRIPPNV IGRLSQLEEL YLGLCGFKFD EWVVEGSTDA
760 770 780 790 800
EVRNASLFEE LNKLPRLTIL VLEVGDSERV PEDFVFPELQ NYTIAIGGYA
810 820 830 840 850
HEAYPSRPYL KIQKTTSLHA FENLFEEVEL LELNSIVNFQ SLVDARNYQH
860 870 880 890 900
VPVTFSNLSV LKIESMNCFK GLCNGQPPRG FLKKLETLEI TRCGSVKSVF
910 920 930 940 950
PPSVTKNLVQ LKSVKIVDCD MLKQIFEGIE GGNDHKVLQK LETLEVRGCG
960 970 980 990 1000
NLKSLFPPPV ARNLVQLKSV KITTCDVLEQ IFDEGMEGDN DRALSKLETL
1010 1020 1030 1040 1050
KICGSLKSVF PLGVAKMLVQ LKSLNIDGCH KLEQIFEEIL EGADEVLQKL
1060 1070 1080 1090 1100
ESLEIRRCSS LKSLFPQSVA EKLVQLKLLH IEDCDMLEKI TEEMEVDDGE
1110 1120 1130 1140 1150
ILSASTPYLL PNLETLKIGD CAKLECLIDT RKQHLPAINA VSNLEELELT
1160 1170 1180 1190 1200
GMTSLKWVFN GDCPKGLLHK LQTLKISKCG SMTSLFPLSF ARNLLQLKKL
1210 1220 1230 1240 1250
EIEDCDMLER LVLEDDNFIE MLSNNHPHPP CLQELEEVAI RRCCKLEYVF
1260 1270 1280 1290 1300
PSSLVGNLNL PRLRYLWLEN LFELKEIERD GNDVCLNLPI SLKDLHLSGC
1310 1320 1330 1340 1350
PKLRPFIVSS THQMEWISIE GAGSEQLWNN NNPVVAQGRL ENSSNMEYAV
1360 1370 1380 1390 1400
IGNHVEQMFH LHQSGNNILS NLWWLAVQNL AELRVIWRTS RQLVTLQNLG
1410 1420 1430 1440 1450
YITVVGCKSL RYVFSPLLAP SLPKLEYLEI NGCEDLEQIV DTSSPSSSLE
1460 1470 1480 1490 1500
DHHDLQSLSF PNLERIKIES CNNLKYVFPI SIFAHLQRLR SIEISKAWKL
1510 1520 1530 1540 1550
EQVFGSGKDD DHQQEKVLQL PQLKWLSLEE LPSLISFSSV DYHFLFPSLK
1560 1570 1580 1590 1600
VLKVRDCRQM TTTFSIDSQS RVHAKPLQRL DVLLPELQFC DVLPPQVNGT
1610 1620 1630 1640
VKPLTWQCHV GQVGLTWHCH TRASQQIEDS AAAQKEMWAR GSDIEYSN
Length:1,648
Mass (Da):187,365
Last modified:April 12, 2017 - v1
Checksum:i4E49A638D44E0771
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01009122 Genomic DNA Translation: OMO87989.1

Genome annotation databases

EnsemblPlantsiOMO87989; OMO87989; CCACVL1_08614
GrameneiOMO87989; OMO87989; CCACVL1_08614

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01009122 Genomic DNA Translation: OMO87989.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOMO87989; OMO87989; CCACVL1_08614
GrameneiOMO87989; OMO87989; CCACVL1_08614

Phylogenomic databases

OMAiMEWISIE

Family and domain databases

Gene3Di3.40.50.10140, 1 hit
3.80.10.10, 4 hits
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR032675 LRR_dom_sf
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR000157 TIR_dom
IPR035897 Toll_tir_struct_dom_sf
PfamiView protein in Pfam
PF00931 NB-ARC, 1 hit
PF01582 TIR, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SM00255 TIR, 1 hit
SUPFAMiSSF52200 SSF52200, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50104 TIR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1R3IZH0_COCAP
AccessioniPrimary (citable) accession number: A0A1R3IZH0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 7, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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