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Protein
Submitted name:

Ubiquitin

Gene

CCACVL1_21876

Organism
Corchorus capsularis (Jute)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Names & Taxonomyi

Protein namesi
Submitted name:
UbiquitinImported
Gene namesi
ORF Names:CCACVL1_21876Imported
OrganismiCorchorus capsularis (Jute)Imported
Taxonomic identifieri210143 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeGrewioideaeApeibeaeCorchorus
Proteomesi
  • UP000188268 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 74Ubiquitin-likeInterPro annotationAdd BLAST58

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili124 – 144Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OMAiECFFVKC

Family and domain databases

InterProiView protein in InterPro
IPR024974 Sde2_N
IPR029071 Ubiquitin-like_domsf
IPR000626 Ubiquitin_dom
PfamiView protein in Pfam
PF13019 Telomere_Sde2, 1 hit
SMARTiView protein in SMART
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS50053 UBIQUITIN_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1R3H1Q3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDHKISGDN NDNRRQLQLF VKLLNGQTLS LQFPSSKVQV GSVKQRIHEI
60 70 80 90 100
TQIPINFQRL IRGHQLNDDS VISQSNATLN LSLRLLGGKG GFGSLLRGAA
110 120 130 140 150
TKAGQKKTSN FDACRDMSGR RLRHVNAEKR LEEWKAEEEN RKLEKIAEDF
160 170 180 190 200
IKKKAKTGRK GVGDGEAEKY VKKYREESAK CVAVVEESVR AALQNGKRKA
210 220 230 240 250
VPGGADPKRL KIWMGKRKLN ESDSDDSSED EDDEENEKSV VLNNGNHSDS
260 270 280 290 300
SKGTEGSSGS VAGGRKEGDS SGGLSSECGS EEEREIVLQQ SSESGGEDAV
310 320 330 340 350
NVNKGMAEIE PEVHEEMMGQ SADAACMKGD VIGGSEAAHS EMQKPDGTKT
360 370 380 390 400
DAQVEIVSLH PSVPVSENGG VESTAIDDKA KSGDHVEMAI SSNNVAEPEK
410 420 430 440 450
PLNFDDFNSP KEMEVLGLER LKSELQARGL KCGGTLPERA ARLFLLKSTP
460
LDKLPKKLLA KK
Length:462
Mass (Da):50,203
Last modified:April 12, 2017 - v1
Checksum:i580A08649BE8304D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01012821 Genomic DNA Translation: OMO64298.1

Genome annotation databases

EnsemblPlantsiOMO64298; OMO64298; CCACVL1_21876
GrameneiOMO64298; OMO64298; CCACVL1_21876

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01012821 Genomic DNA Translation: OMO64298.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOMO64298; OMO64298; CCACVL1_21876
GrameneiOMO64298; OMO64298; CCACVL1_21876

Phylogenomic databases

OMAiECFFVKC

Family and domain databases

InterProiView protein in InterPro
IPR024974 Sde2_N
IPR029071 Ubiquitin-like_domsf
IPR000626 Ubiquitin_dom
PfamiView protein in Pfam
PF13019 Telomere_Sde2, 1 hit
SMARTiView protein in SMART
SM00213 UBQ, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
PROSITEiView protein in PROSITE
PS50053 UBIQUITIN_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1R3H1Q3_COCAP
AccessioniPrimary (citable) accession number: A0A1R3H1Q3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 7, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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