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Protein
Submitted name:

CRISPR-associated protein Cpf1, subtype PREFRAN

Gene

SAMN04488494_1333

Organism
Prevotella ruminicola (Bacteroides ruminicola)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CRISPR-associated protein Cpf1, subtype PREFRANImported
Gene namesi
ORF Names:SAMN04488494_1333Imported
OrganismiPrevotella ruminicola (Bacteroides ruminicola)Imported
Taxonomic identifieri839 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella
Proteomesi
  • UP000184280 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

SMRiA0A1M7G246
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili92 – 112Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR027620 Cas12a
TIGRFAMsiTIGR04330 cas_Cpf1, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1M7G246-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIDLKQFIGI YPVSKTLRFE LRPVGKTQEW IEKNRVLEGD EQKAADYPVV
60 70 80 90 100
KKLIDDYHKV CIHDSLNHVH FDWEPLKDAI EIFQKTKSDE AKKRLEAEQA
110 120 130 140 150
MMRKKIAAAI KDFKHFKELT AATPSDLITS VLPEFSDDGS LKSFRGFATY
160 170 180 190 200
FSGFQENRNN IYSQEAISTG VPYRLVHDNF PKFLSDLEVF ERIKSTCPEV
210 220 230 240 250
INQASAELQP FLEGVMIDDI FSLDFYNSLL TQNGIDFFNQ VIGGVSEKDK
260 270 280 290 300
QKYRGINEFS NLYRQQHKEI AASKKAMTMI PLFKQILSDR DTLSYIPAQI
310 320 330 340 350
RTEDELVSSI TQFYDHITHF EHDGKTINVL SEIVALLGKL DTYDPNGICI
360 370 380 390 400
TARKLTDISQ KVYGKWSVIE EKMKEKAIQQ YGDISVAKNK KKVDAFLSRK
410 420 430 440 450
AYSLSDLCFD EEISFSRYYS ELPQTLNAIS GYWLQFNEWC KSDEKQKFLN
460 470 480 490 500
NQTGTEVVKS LLDAMMELFH KCSVLVMPEE YEVDKSFYNE FLPLYEELDT
510 520 530 540 550
LFLLYNKVRN YLTQKPSDVK KFKLNFESPS LASGWDQNKE MKNNAILLFK
560 570 580 590 600
DGKSYLGVLN AKNKAKIKDA KGDVSSSSYK KMIYKLLSDP SKDLPHKIFA
610 620 630 640 650
KGNLDFYKPS EYILEGRELG KYKKGPNFDK KFLHDFIDFY KAAISIDPDW
660 670 680 690 700
SKFNFQYSPT ESYDDIGMFF SEIKKQAYKI RFTDISEAQV NEWVDNGQLY
710 720 730 740 750
LFQLYNKDYA EGAHGRKNLH TLYWENLFTD ENLSNLVLKL NGQAELFCRP
760 770 780 790 800
QSIKKPVSHK IGSKMLNRRD KSGMPIPESI YRSLYQYYNG KKKESELTVA
810 820 830 840 850
EKQYIDQVIV KDVTHEIIKD RRYTRQEYFF HVPLTFNANA DGNEYINEHV
860 870 880 890 900
LNYLKDNPDV NIIGIDRGER HLIYLTLINQ RGEILKQKTF NVVNSYNYQA
910 920 930 940 950
KLEQREKERD EARKSWDSVG KIKDLKEGFL SAVIHEITNM MIENNAIVVL
960 970 980 990 1000
EDLNFGFKRG RFKVERQVYQ KFEKMLIDKL NYLSFKDREA GEEGGILRGY
1010 1020 1030 1040 1050
QMAQKFISFQ RLGKQSGFLF YIPAAYTSKI DPVSGFVNHF NFSDITNAEK
1060 1070 1080 1090 1100
RKDFLMKMDR IEMKNGNIEF TFDYRKFKTF QTDYQNVWTV STFGKRIVMR
1110 1120 1130 1140 1150
IDEKGYKKMV DYEPTNDIIK AFKNKGILLS EGSDLKALIA EIEANATNAG
1160 1170 1180 1190 1200
FYSTLLYAFQ KTLQMRNSNA VTEEDYILSP VAKDGHQFCS TDEANKGKDA
1210 1220 1230 1240 1250
QGNWVSKLPV DADANGAYHI ALKGLYLLRN PETKKIENEK WLQFMVEKPY

LE
Length:1,252
Mass (Da):145,541
Last modified:March 15, 2017 - v1
Checksum:i59773E3CCAC50FF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FRCJ01000002 Genomic DNA Translation: SHM10452.1
RefSeqiWP_073043853.1, NZ_FRCJ01000002.1

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FRCJ01000002 Genomic DNA Translation: SHM10452.1
RefSeqiWP_073043853.1, NZ_FRCJ01000002.1

3D structure databases

SMRiA0A1M7G246
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR027620 Cas12a
TIGRFAMsiTIGR04330 cas_Cpf1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1M7G246_PRERU
AccessioniPrimary (citable) accession number: A0A1M7G246
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2017
Last sequence update: March 15, 2017
Last modified: January 31, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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