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Protein
Submitted name:

Uncharacterized protein

Gene

XELAEV_18018341mg

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:XELAEV_18018341mgImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus
Proteomesi
  • UP000186698 Componenti: Chromosome 3l

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini62 – 115BHLHInterPro annotationAdd BLAST54
Domaini133 – 208PASInterPro annotationAdd BLAST76
Domaini341 – 392PASInterPro annotationAdd BLAST52

Keywords - Domaini

RepeatSAAS annotation

Family and domain databases

CDDicd00083 HLH, 1 hit
cd00130 PAS, 2 hits
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR001067 Nuc_translocat
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR013767 PAS_fold
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF00989 PAS, 1 hit
PRINTSiPR00785 NCTRNSLOCATR
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00091 PAS, 2 hits
SUPFAMiSSF47459 SSF47459, 1 hit
SSF55785 SSF55785, 3 hits
TIGRFAMsiTIGR00229 sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS50112 PAS, 2 hits

Sequencei

Sequence statusi: Complete.

A0A1L8H0U4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATPTAVNPS EMTTDIPGSV NLPGAPMAAG QVRMAGPMPA RGGKRRSGMD
60 70 80 90 100
FDDEDGEGPS KFSRENHSEI ERRRRNKMTQ YITELSDMVP TCSALARKPD
110 120 130 140 150
KLTILRMAVS HMKSMRGTGN KSTDGAYKPS FLTEQELKHL ILEAADGFLF
160 170 180 190 200
VVATETGRVI YVSDSVTPVL NQPQSEWFGS TLYEHTHPDD IEKLREQLCT
210 220 230 240 250
SENSMTGRIL DLKTGTVKKE GQQSSMRMCM GSRRSFICRL RCGNAPLDHL
260 270 280 290 300
PLNRISTMRK RYRNGLGPVK EGEAQYSVVH CTGYIKAWPP AGMTIPEEDA
310 320 330 340 350
DVGQGSKYCL VAIGRLQVTS SPGCLDMNGM SLPTEFLSRH NTEGVITFVD
360 370 380 390 400
PRCISIIGYQ PQDLLGKDII EFCHPEDQSH LRESFQQVVK LKGQVLSVMY
410 420 430 440 450
RFHTKTRDWM LLRTSSFTFQ NPYSDEIEYI ICTNSNVKQV QQQQAELEVH
460 470 480 490 500
PRDSLSSYDL SQVPVPNLAA NVHEGGKSVV DKPDPIFSQD RDPRFAEMFA
510 520 530 540 550
GITASEKKML SASGSGAQQL YSTGSPFQTG HSGKSFSSSV VHVTGVNEIQ
560 570 580 590 600
SPSATGQTLS QISRQMNAGQ VWTGSRPPFQ GQQIPSQTSK AQSSPFGIGT
610 620 630 640 650
SHTYTSDPST YSPLSSPATS SPSGNAYSSL GGRSAAFTET GQSSSQFQGR
660 670 680 690 700
ASEVWSQWQS QHHNQPSSEQ HPHQQPAQAE VFQDMLPMSG DPTQGTGNYN
710
IEDFADLGMF PPFSE
Length:715
Mass (Da):78,549
Last modified:March 15, 2017 - v1
Checksum:i36A6FB62E005681C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM004470 Genomic DNA Translation: OCT89722.1
RefSeqiXP_018106068.1, XM_018250579.1
UniGeneiXl.58062

Genome annotation databases

GeneIDi100335108

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM004470 Genomic DNA Translation: OCT89722.1
RefSeqiXP_018106068.1, XM_018250579.1
UniGeneiXl.58062

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100335108

Organism-specific databases

CTDi100335108

Family and domain databases

CDDicd00083 HLH, 1 hit
cd00130 PAS, 2 hits
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR001067 Nuc_translocat
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR013767 PAS_fold
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF00989 PAS, 1 hit
PRINTSiPR00785 NCTRNSLOCATR
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00091 PAS, 2 hits
SUPFAMiSSF47459 SSF47459, 1 hit
SSF55785 SSF55785, 3 hits
TIGRFAMsiTIGR00229 sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS50112 PAS, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1L8H0U4_XENLA
AccessioniPrimary (citable) accession number: A0A1L8H0U4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2017
Last sequence update: March 15, 2017
Last modified: September 12, 2018
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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