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Protein
Submitted name:

Uncharacterized protein

Gene

HNRNPH2

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Enzyme and pathway databases

ReactomeiR-GGA-6803529 FGFR2 alternative splicing
R-GGA-72163 mRNA Splicing - Major Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:HNRNPH2Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 13

Expressioni

Gene expression databases

ExpressionAtlasiA0A1L1RW05 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 111RRMInterPro annotationAdd BLAST78
Domaini212 – 287RRMInterPro annotationAdd BLAST76

Phylogenomic databases

GeneTreeiENSGT00760000119102

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR012996 Znf_CHHC
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
PF08080 zf-RNPHF, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

A0A1L1RW05-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGHRYVEVFK SNNVEMDWVL KHTGPNSPDT ANDGFVRLRG LPFGCSKEEI
60 70 80 90 100
VQFFSGLEIV PNGITLPVDF QGRSTGEAFV QFASQEIAEK ALKKHKERIG
110 120 130 140 150
HRYIEIFKSS RAEVRTHYDP PRKLMAMQRP GPYDRPGLTR GYNSLGRGSG
160 170 180 190 200
LERMRRGAYG GGYGGYDDYN GYNDGYGFGS DRFGREWTLF SAGMSDHRYG
210 220 230 240 250
DGTSTFQSTT GHCVHMRGLP YRATENDIYN FFSPLNPVRV HIEIGPDGRV
260 270 280 290 300
TGEADVEFAT HEDAVAAMSK DKANMQHRYV ELFLNSTAGG TGGAYGSQMM
310 320 330 340 350
GAMVKESEGV VQDWNTSTLA GSQSSYGGPA NQQLSGGYGG GYGGQSSMSG
360 370 380 390
YDPGSQGAMN SSYYSSGNRA SMGVNGMGGM SNMSNMSGGW GM
Length:392
Mass (Da):42,572
Last modified:February 15, 2017 - v1
Checksum:i12C279D5DBB956A2
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1D5PDS3A0A1D5PDS3_CHICK
Uncharacterized protein
HNRNPH2
394Annotation score:
A0A1D5PU56A0A1D5PU56_CHICK
Uncharacterized protein
HNRNPH2
361Annotation score:
A0A1L1RV66A0A1L1RV66_CHICK
Uncharacterized protein
HNRNPH2
270Annotation score:
A0A1L1RW44A0A1L1RW44_CHICK
Uncharacterized protein
HNRNPH2
491Annotation score:
A0A1D5NY02A0A1D5NY02_CHICK
Uncharacterized protein
HNRNPH2
498Annotation score:
A0A1D5P259A0A1D5P259_CHICK
Uncharacterized protein
HNRNPH2
518Annotation score:
A0A1D5PQ19A0A1D5PQ19_CHICK
Heterogeneous nuclear ribonucleopro...
HNRNPH2
199Annotation score:
A0A1L1RWN1A0A1L1RWN1_CHICK
Heterogeneous nuclear ribonucleopro...
HNRNPH2
385Annotation score:
A0A1L1RPQ5A0A1L1RPQ5_CHICK
Uncharacterized protein
HNRNPH2
125Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000141 Genomic DNA No translation available.
AADN04000142 Genomic DNA No translation available.
RefSeqiXP_015149214.1, XM_015293728.1
UniGeneiGga.4880

Genome annotation databases

EnsembliENSGALT00000084746; ENSGALP00000063011; ENSGALG00000031120
GeneIDi395157

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000141 Genomic DNA No translation available.
AADN04000142 Genomic DNA No translation available.
RefSeqiXP_015149214.1, XM_015293728.1
UniGeneiGga.4880

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000084746; ENSGALP00000063011; ENSGALG00000031120
GeneIDi395157

Organism-specific databases

CTDi3188

Phylogenomic databases

GeneTreeiENSGT00760000119102

Enzyme and pathway databases

ReactomeiR-GGA-6803529 FGFR2 alternative splicing
R-GGA-72163 mRNA Splicing - Major Pathway

Gene expression databases

ExpressionAtlasiA0A1L1RW05 baseline and differential

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR012996 Znf_CHHC
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
PF08080 zf-RNPHF, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1L1RW05_CHICK
AccessioniPrimary (citable) accession number: A0A1L1RW05
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2017
Last sequence update: February 15, 2017
Last modified: October 10, 2018
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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