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Protein
Submitted name:

Sulfur dehydrogenase subunit SoxD

Gene

SAMN04244548_05134

Organism
Paracoccus pantotrophus (Thiosphaera pantotropha)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandHemePROSITE-ProRule annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Sulfur dehydrogenase subunit SoxDImported
Gene namesi
ORF Names:SAMN04244548_05134Imported
OrganismiParacoccus pantotrophus (Thiosphaera pantotropha)Imported
Taxonomic identifieri82367 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000182666 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_501333536125 – 383Sequence analysisAdd BLAST359

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 145Cytochrome cInterPro annotationAdd BLAST89
Domaini279 – 382Cytochrome cInterPro annotationAdd BLAST104

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di1.10.760.10, 2 hits
InterProiView protein in InterPro
IPR009056 Cyt_c-like_dom
IPR036909 Cyt_c-like_dom_sf
IPR002327 Cyt_c_1A/1B
PANTHERiPTHR11961 PTHR11961, 1 hit
PfamiView protein in Pfam
PF00034 Cytochrom_C, 1 hit
PF13442 Cytochrome_CBB3, 1 hit
PRINTSiPR00604 CYTCHRMECIAB
SUPFAMiSSF46626 SSF46626, 2 hits
PROSITEiView protein in PROSITE
PS51007 CYTC, 2 hits

Sequencei

Sequence statusi: Complete.

A0A1K2FDF9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKSLELFLG SVLAASVLAG PAMAEKLGLG RVALPEEISA WDTAVLPDGQ
60 70 80 90 100
GLRPGSGDVA TGDALFADNC ASCHGDFAEG LDSWPVLAGG DGSLTDPRPV
110 120 130 140 150
KTIGSYWPYL STVYDYVHRS MPFGSAQTLS VDDTYAITAF LLYSNGLVED
160 170 180 190 200
DFVLTHENFT KVVLPNAEGF YPDDRDQSEY PLFSKEPCMT DCAVGVEITK
210 220 230 240 250
RAVDLNVTPE DPDGRPAGSM PNLGAAADPA EPAAPVEKKA EAAPAEAPAQ
260 270 280 290 300
AAPEVVVKTA AAAPETPAPA EAAAAADPAL LAEGEKVFKK CAACHKVGDG
310 320 330 340 350
AKNSTGPTLN GIVGSPAGKV EGFKYSKPLL AMAADGLVWD DASLHTYLEN
360 370 380
PKGMIKGGKM SFAGLKKEDE RAAVIAYLAT FAK
Length:383
Mass (Da):39,766
Last modified:February 15, 2017 - v1
Checksum:i6E5F5093C23338E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FPKI01000073 Genomic DNA Translation: SFY45077.1
RefSeqiWP_072464277.1, NZ_FPKI01000073.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FPKI01000073 Genomic DNA Translation: SFY45077.1
RefSeqiWP_072464277.1, NZ_FPKI01000073.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.760.10, 2 hits
InterProiView protein in InterPro
IPR009056 Cyt_c-like_dom
IPR036909 Cyt_c-like_dom_sf
IPR002327 Cyt_c_1A/1B
PANTHERiPTHR11961 PTHR11961, 1 hit
PfamiView protein in Pfam
PF00034 Cytochrom_C, 1 hit
PF13442 Cytochrome_CBB3, 1 hit
PRINTSiPR00604 CYTCHRMECIAB
SUPFAMiSSF46626 SSF46626, 2 hits
PROSITEiView protein in PROSITE
PS51007 CYTC, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1K2FDF9_PARPN
AccessioniPrimary (citable) accession number: A0A1K2FDF9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2017
Last sequence update: February 15, 2017
Last modified: July 18, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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