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Protein

Lipoxygenase

Gene

GA_TR20138_c0_g1_i1_g.67302

Organism
Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.UniRule annotation

Cofactori

Fe cationUniRule annotationSAAS annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDioxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesisUniRule annotation
LigandIronUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00382

Names & Taxonomyi

Protein namesi
Recommended name:
LipoxygenaseUniRule annotation (EC:1.13.11.-UniRule annotation)
Gene namesi
ORF Names:GA_TR20138_c0_g1_i1_g.67302Imported
OrganismiNoccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)Imported
Taxonomic identifieri107243 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeColuteocarpeaeNoccaea

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 183PLATInterPro annotationAdd BLAST141
Domaini186 – 881LipoxygenaseInterPro annotationAdd BLAST696

Sequence similaritiesi

Belongs to the lipoxygenase family.UniRule annotation

Family and domain databases

Gene3Di4.10.372.10, 1 hit
InterProiView protein in InterPro
IPR000907 LipOase
IPR013819 LipOase_C
IPR036226 LipOase_C_sf
IPR020834 LipOase_CS
IPR020833 LipOase_Fe_BS
IPR001246 LipOase_plant
IPR027433 Lipoxygenase_dom_3
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf
PANTHERiPTHR11771 PTHR11771, 1 hit
PfamiView protein in Pfam
PF00305 Lipoxygenase, 1 hit
PF01477 PLAT, 1 hit
PRINTSiPR00087 LIPOXYGENASE
PR00468 PLTLPOXGNASE
SMARTiView protein in SMART
SM00308 LH2, 1 hit
SUPFAMiSSF48484 SSF48484, 1 hit
SSF49723 SSF49723, 1 hit
PROSITEiView protein in PROSITE
PS00711 LIPOXYGENASE_1, 1 hit
PS00081 LIPOXYGENASE_2, 1 hit
PS51393 LIPOXYGENASE_3, 1 hit
PS50095 PLAT, 1 hit

Sequencei

Sequence statusi: Fragment.

A0A1J3C8U9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TDFHPLQLKK LSEKLEEISI SKKLPKMFDD LVDLFTGGGN AKLKGTVVLM
60 70 80 90 100
KKNVLDFNDF NASFLDRLHE FLGNKVSLRL ISSDASDPEN GSKGKLGKAA
110 120 130 140 150
HLEDWITTIT SLTVGESAFK VTFDYDKDFG YPGAFLIRNS HFSEFYLKSL
160 170 180 190 200
TLEDVPGHGR VHYVCNSWVY PAKNYTKDRV FFANKTYLPH ETPEPLLKYR
210 220 230 240 250
EEELVSLRGT GEGELKEWDR VYDYAYYNDL GVPPKNPRPV LGGTEEYPYP
260 270 280 290 300
RRGRTGRKPT EEDPQTESRL PITSSLDIYV PRDERFGHLK MSDFLAYALK
310 320 330 340 350
AIAQIIQPAL EAVFDETPKE FDSFEDVLKI YEEGIDLPNQ SLIDSIVKNI
360 370 380 390 400
PLEMLKEIFR TDGQKFLKYP VPQVIKEDKT AWRTDEEFAR EMLAGLNPVV
410 420 430 440 450
IQLLQEFPPK SKLDSESYGN QNSTITKNHI EQSLDGLTVE EALEKERLFI
460 470 480 490 500
LDHHDTLMPY LERINTTGTK TYATRTLLFL KDDGTLKPLV IELSLPHPDG
510 520 530 540 550
DRFGAVSEVY TPGEGVYDSL WQLAKAYVGV NDSGNHQLIS HWLQTHASIE
560 570 580 590 600
PFVIATNRQL SVLHPVFKLL EPHYRDTMNI NALARTILIN GGGIFEITVF
610 620 630 640 650
PSKYAMEMSS FIYKNHWTFP DQALPAELKK RGMAVEDPEA PHGLRLRIKD
660 670 680 690 700
YPYAVDGLEV WYAIESWVQD YISVYYKTDE DVQTDTELQA WWKEVREEGH
710 720 730 740 750
GDKKSETWWP KMQTRQELIE SCTIIIWVAS ALHAAVNFGQ YPIAGYLPNR
760 770 780 790 800
PTISRQLMPK ENTLEFEELE KNPDKVFLKT ISAQLQTLLG ISLIEILSTH
810 820 830 840 850
SSDEVYLGQR DSKEWAAEKE ALDAFEKFGE RVKEIEKKID ARNEDESLKN
860 870 880
RNGPVKMPYT SLFPTSVGGV TGRGIPNSVS I
Length:881
Mass (Da):100,541
Last modified:February 15, 2017 - v1
Checksum:iECA59FED632B19B9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEVI01028158 Transcribed RNA Translation: JAU04162.1

Similar proteinsi

Entry informationi

Entry nameiA0A1J3C8U9_NOCCA
AccessioniPrimary (citable) accession number: A0A1J3C8U9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2017
Last sequence update: February 15, 2017
Last modified: March 28, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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