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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Macrostomum lignano
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiMacrostomum lignanoImported
Taxonomic identifieri282301 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesRhabditophoraMacrostomorphaMacrostomidaMacrostomidaeMacrostomum
Proteomesi
  • UP000095280 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei107 – 132HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 95Neur_chan_LBDInterPro annotationAdd BLAST90
Domaini113 – 167Neur_chan_membInterPro annotationAdd BLAST55

Sequence similaritiesi

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1I8JFK5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VEIRNHDQSK LLAEISSDGQ VQTKLAFGLT KKCNMQLASF PFDKQQCNFS
60 70 80 90 100
MASGQRPPNS LRLRVVRSIA IDLSIRFLRS NEYCVTAVDS ILKWVYSSYH
110 120 130 140 150
QMERLPMYYV IVLIIPSALI LATCIFGFLL PADSGDRLAL NVAILLSMSV
160
FLQLAGSITP AQSESVPV
Length:168
Mass (Da):18,672
Last modified:January 18, 2017 - v1
Checksum:i5DF7BF6756154B28
GO

Genome annotation databases

WBParaSiteimaker-uti_cns_0047318-snap-gene-0.5-mRNA-1; maker-uti_cns_0047318-snap-gene-0.5-mRNA-1; maker-uti_cns_0047318-snap-gene-0.5

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

WBParaSiteimaker-uti_cns_0047318-snap-gene-0.5-mRNA-1; maker-uti_cns_0047318-snap-gene-0.5-mRNA-1; maker-uti_cns_0047318-snap-gene-0.5

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1I8JFK5_9PLAT
AccessioniPrimary (citable) accession number: A0A1I8JFK5
Entry historyiIntegrated into UniProtKB/TrEMBL: January 18, 2017
Last sequence update: January 18, 2017
Last modified: February 28, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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