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Entry version 23 (19 Jan 2022)
Sequence version 1 (18 Jan 2017)
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Protein
Submitted name:

Type VI secretion protein

Gene

AUO97_14000

Organism
Acinetobacter baumannii
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Type VI secretion proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AUO97_14000Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiAcinetobacter baumanniiImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri470 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaMoraxellalesMoraxellaceaeAcinetobacterAcinetobacter calcoaceticus/baumannii complex
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000072389 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini188 – 444IcmF-related_NInterPro annotationAdd BLAST257
Domaini496 – 837IcmF-relatedInterPro annotationAdd BLAST342
Domaini1107 – 1197IcmF_CInterPro annotationAdd BLAST91

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR009612, IcmF-related
IPR025743, IcmF-related_N_dom
IPR010623, IcmF_C
IPR027417, P-loop_NTPase
IPR017731, TssM1-like

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF06761, IcmF-related, 1 hit
PF14331, IcmF-related_N, 1 hit
PF06744, IcmF_C, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540, SSF52540, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03348, VI_IcmF, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A1E3M2K6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHTILGYLWQ YITNPKAIIA LSLFVALMSS YTSIPRHIFW ALASAYALGL
60 70 80 90 100
IAYGIYWLIQ RKKHAVQGEE LAQAIEKDTQ AEYGKNKDKE ELQLISQQMK
110 120 130 140 150
ESIQLIRKSK LGDKKGNAAL YELPWYMVIG NPAAGKSSAI YNSGLKFPFE
160 170 180 190 200
ETHQKMVSAG LSGTRNCDWF FSTEGILLDT AGRYSVYSED HSEWLGFLNI
210 220 230 240 250
LKKNRSKAPV NGLILIVSIA ELVSQSPEHS LKLAKNLRAR IQDLTERLEV
260 270 280 290 300
VVPVYLVFSK MDLIAGFTEF FEFYEAQEYN QAWGATLPYE QNSSHNAVDL
310 320 330 340 350
FEKHYNILYD GLKGVSSTHL SRRHSQNISP SVMTFPLEFK TLKPALKSFI
360 370 380 390 400
ATLFEDNPYQ FQPVFRGFYF TSALQEGVIE SPMTEQIAQE FQLSQIAQSE
410 420 430 440 450
VKDQLKTTPN HGYFLKGLFS DVILKDKDLV KQHVNTSKKR QRYIAFIGAL
460 470 480 490 500
AGVSIILGVW VWSYRNNQQL IAEVQADLNK VVQLEKSSGQ QLSTQLEALL
510 520 530 540 550
VLQRRLQQLD EFDENRPLKF SFGLYQGNEL REKLKAEYLK GVKQIVLIPT
560 570 580 590 600
QQNIAQYLQR VKNNEATLKA NHTNVEIKQT AQTQQYLEPS DTNPQDAYNA
610 620 630 640 650
LKAYLMMSNP QYMDASHLSD QVTRFWRSWL DANKGQMPRA DMIQEAEQIL
660 670 680 690 700
SYAMTLANDK QFPILDADSQ LVDQTRQVLL SVIRGMPARD RVYNQIKMRA
710 720 730 740 750
AVRFPALTVS QIVGDANKNI VLGSYALPGV FTQKAWNEYV EKAMEEAADK
760 770 780 790 800
PTDTKDWVLN SRQSDDLTFS GSPEQIRKQL TALYKQEYIA EWRKFLSGIH
810 820 830 840 850
YAKATQFAQQ VKNIDVLGEP QNSPIRTLIE RVAIETNWDN PVVQAELAAP
860 870 880 890 900
QKGFIAWFKR KVLNHDDKQL ANQAVTNAQG PISQEYQMFY QLVRKRDDQQ
910 920 930 940 950
GKSLLDEYMT NLALVRSKFN ELKNAGEIGP NAMTLVKQTL NEQTSVFNQT
960 970 980 990 1000
QKIVDEKMAV GFSEIDQQLL QKLVVSPLTQ AFESLITPTQ DEINKLWVMQ
1010 1020 1030 1040 1050
AYQPFTANLA KKYPFNSSAS LQATSSEIGQ ILGENGSISR FVKESLDPFV
1060 1070 1080 1090 1100
IRRGYTLTSK TWKDLGISLN PQFVMNFQRY VAPTNGMATG ELNSQAPAAP
1110 1120 1130 1140 1150
ATNQSNFQFY PIQNPQLLSY TVDIDGQRMT YENGVQQWVN FIWPNQGSIP
1160 1170 1180 1190 1200
GARITAVDLQ GQTHTIFDEP GEYGINRLID SAQRKEQNGG FEMLWRSKTD
1210 1220 1230 1240 1250
PSLFVKMNFR LISSNSGSIG SSRGYSGMQL VDKVTADKAA RVVSAQQAPA
1260 1270
QAAAPAKTEN PVSALAQPAA GVKP
Length:1,274
Mass (Da):143,877
Last modified:January 18, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3BB2E4B7B941810E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP018664 Genomic DNA Translation: APP31867.1

NCBI Reference Sequences

More...
RefSeqi
WP_049594841.1, NZ_WPIQ01000008.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ODP68818; ODP68818; BGC29_07485
QAB40915; QAB40915; EHF38_11430

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP018664 Genomic DNA Translation: APP31867.1
RefSeqiWP_049594841.1, NZ_WPIQ01000008.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiODP68818; ODP68818; BGC29_07485
QAB40915; QAB40915; EHF38_11430

Family and domain databases

InterProiView protein in InterPro
IPR009612, IcmF-related
IPR025743, IcmF-related_N_dom
IPR010623, IcmF_C
IPR027417, P-loop_NTPase
IPR017731, TssM1-like
PfamiView protein in Pfam
PF06761, IcmF-related, 1 hit
PF14331, IcmF-related_N, 1 hit
PF06744, IcmF_C, 1 hit
SUPFAMiSSF52540, SSF52540, 1 hit
TIGRFAMsiTIGR03348, VI_IcmF, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1E3M2K6_ACIBA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1E3M2K6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 18, 2017
Last sequence update: January 18, 2017
Last modified: January 19, 2022
This is version 23 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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