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UniProtKB - A0A1D6NYB7 (A0A1D6NYB7_MAIZE)

Entry version 27 (29 Sep 2021)
Sequence version 1 (30 Nov 2016)
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Protein
Submitted name:

Autophagy 2

Gene

ZEAMMB73_Zm00001d045692

Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Autophagy 2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:ZEAMMB73_Zm00001d045692Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiZea mays (Maize)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4577 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogonodae › Andropogoneae › Tripsacinae › Zea
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007305 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Endoplasmic reticulumARBA annotation, MembraneARBA annotation

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini14 – 104Chorein_NInterPro annotationAdd BLAST91
Domaini1822 – 1915ATG_CInterPro annotationAdd BLAST94

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni112 – 140DisorderedSequence analysisAdd BLAST29

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ATG2 family.ARBA annotation

Phylogenomic databases

Database of Orthologous Groups

More...OrthoDBi		40783at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR026849, ATG2
IPR015412, Autophagy-rel_C
IPR026854, VPS13-like_N

The PANTHER Classification System

More...PANTHERi		PTHR13190, PTHR13190, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF09333, ATG_C, 1 hit
PF12624, Chorein_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A1D6NYB7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGFLDGLRLD TLLKRVCKSL LKKRLGDLIL GDLDLDQFDI QLGRGTVQLN 
        60         70         80         90        100
DLALNAEFIN HKLSGSPIML KEGSIKSLLV RFTTSCEIVV EELELVLVPS 
       110        120        130        140        150
VASEVDNVHT ECSVSGSTSD TQTLVNTERS ESDSNQCSTS VSRDVDEGVK 
       160        170        180        190        200
RIANAIKWFL TSFNIKLKNV YVVFDPQINL NSRLPETSRS LVFRIKEVEF 
       210        220        230        240        250
GTQLGLFKLD NFLTFREAVI EFLKMDDVDT LLQNDPIRGI AGISASHSTT 
       260        270        280        290        300
AVLTGPIGGF SGKLNLSIPW NKGCLNFEKI DADVSIDSLE LRLQFCSIRW 
       310        320        330        340        350
IMHVWDSLQK KTVDEQSCVH NIADISISSS SSGLCPSASS SLKPGSDSVK 
       360        370        380        390        400
ATSEYLVQST FSQSGQDKIQ DSFLTRANVI KDWMDPVARN DLGDPDSDCD 
       410        420        430        440        450
ESIDQFFECF EELRNSQSSL GNSGIWDWTC SVFNAISFAS TLASGSDQVP 
       460        470        480        490        500
KESVVEKTLR ASITELSVLL LFSDDTDIEN SSVPVSTSGD MRNSEMFSSC 
       510        520        530        540        550
LSSMHFEKSI MSPATASSLN MHHLKAKCEN ILLDLQTYPK FVRFKASIAQ 
       560        570        580        590        600
IKLDEYYHAR NICSDDSNLG NHFLNNNLQQ GVQASLPQCL FAAGDHSVET 
       610        620        630        640        650
YEFCGNSSSE LTRVELLKTF GKSTFYYDVS TKDQDGNLVS STSMSIRLAP 
       660        670        680        690        700
LLLWVHFHTI YMLLSFVSKV ESDLSHGEKH GDEKGSRLST STNSSSIGSL 
       710        720        730        740        750
KVQIFLSPAR ITLCFPSEFS WDLSHPSVLD KFLVIDHTSC LNMVETVSYP 
       760        770        780        790        800
QNEFHLSKSC TSIHLAVGNV DIYLVKPVNN VLVGRICSSS RQTFSTMKIL 
       810        820        830        840        850
SVTGTSYNDS GITLIRRKFA VTGPEILNNA WSLPKLHDEK ISKKQNSKWA 
       860        870        880        890        900
GISPSSTHDL VETGSSTRQE LLKSTEVLFH VQLSCVSVQI SKKDCELLNK 
       910        920        930        940        950
LLDHVIEGIS NQQTSISGNS KDQSVLINDI CIQTSVLFEC SILEICTELN 
       960        970        980        990       1000
ETVEVGPLLQ SELKGSWNSL KLKVSKFSLF SCSNVGGISS ASFLWVNHGE 
      1010       1020       1030       1040       1050
GELWGSVSAK NDKVSGESKD FLIVACKDSA CRRGDGEGTN ALSIGAAGCS 
      1060       1070       1080       1090       1100
VTHIRNPKLK ENYTYVDVRS GTIVAPGGRM DWINVICLLF SSGSNGTEKS 
      1110       1120       1130       1140       1150
VDNNTVNSYQ LNDPYSSSLF LEFSDVAVSY EPHFKNFTLS AAPTDPKFFS 
      1160       1170       1180       1190       1200
CLLAASSFKL HNKSASASAA ADFDIQLRDL GILISQSSGS TNATCSYSVG 
      1210       1220       1230       1240       1250
YLHQAGYTKV AQNTFIEASL RLDSTFWKLE IFDSQFDIGT CHDTTYGLIG 
      1260       1270       1280       1290       1300
LGSQLQQLYG PDMQDALDHL QSRWNSVQQA NRQNMAADES DTSESSLEIL 
      1310       1320       1330       1340       1350
ADSGNYQSDG LLDDIIENAF YTEDCMDNHF WERNCHHLFN NSEMDDGFEL 
      1360       1370       1380       1390       1400
NAATSSHEFL RSIPEGNVTQ ISLERNAWPD QIDSYYMPEF HQSLSTLCDE 
      1410       1420       1430       1440       1450
EHKCTFGDNS HRTLESEDAG WYKNVPLTIV ENHVLKQENK QVLQHEVASV 
      1460       1470       1480       1490       1500
CSLNPDEYSN LKGKIHIHDI DVKWRMYAGD EWLLLQKDST SLTFTDGKDR 
      1510       1520       1530       1540       1550
SSSLEFTLRG LSIQVDMYPD GDVSISKLSI AAEDLTLCDQ SIHAPWKLVL 
      1560       1570       1580       1590       1600
GCYNSKDYPR ESWSSAFRLE LESVRPEPQA PLEDYRLHLE ILPLQLHLDQ 
      1610       1620       1630       1640       1650
EQLNFLINFF KNDSCNNDPH SHCENETVDV KNTSNGSNTV VDEALLPFFQ 
      1660       1670       1680       1690       1700
KFDVKPLVLH INYIPRQFDP IALGKGNYAE LLNILPWKGI DLKLKHVSAM 
      1710       1720       1730       1740       1750
GVYGWSSIGD TVAAEWLEDI SKNQVHKLLK GLAPIRSLAA VGSGTRKLVS 
      1760       1770       1780       1790       1800
LPIKSYKKDR KLLKGVQRGT VAFIRSVSIE AVGLGVHLAA GAHDILMKTE 
      1810       1820       1830       1840       1850
HALTTVPPPL ASCEAKRTKH NIRANQPESA QQGMKQAYES LTVGFGRTAS 
      1860       1870       1880       1890       1900
ALIGNPIKVY NRGAGVGSVL ATAICGAPAA AVAPVSASAR ALHYALLGLR 
      1910       1920 
NSLDPEHKKE SMYKYQGPSQ A
Length:1,921
Mass (Da):212,059
Last modified:November 30, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i55682B2A4800900D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1D6NYB9A0A1D6NYB9_MAIZE
Autophagy 2
ZEAMMB73_Zm00001d045692
1,431Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CM000785 Genomic DNA Translation: AQL02987.1
CM000785 Genomic DNA Translation: AQL02990.1
CM000785 Genomic DNA Translation: AQL02991.1
CM000785 Genomic DNA Translation: AQL03000.1

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		Zm00001eb380180_T001; Zm00001eb380180_P001; Zm00001eb380180

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000785 Genomic DNA Translation: AQL02987.1
CM000785 Genomic DNA Translation: AQL02990.1
CM000785 Genomic DNA Translation: AQL02991.1
CM000785 Genomic DNA Translation: AQL03000.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblPlantsiZm00001eb380180_T001; Zm00001eb380180_P001; Zm00001eb380180

Phylogenomic databases

OrthoDBi40783at2759

Family and domain databases

InterProiView protein in InterPro
IPR026849, ATG2
IPR015412, Autophagy-rel_C
IPR026854, VPS13-like_N
PANTHERiPTHR13190, PTHR13190, 1 hit
PfamiView protein in Pfam
PF09333, ATG_C, 1 hit
PF12624, Chorein_N, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1D6NYB7_MAIZE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1D6NYB7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
Last sequence update: November 30, 2016
Last modified: September 29, 2021
This is version 27 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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