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UniProtKB - A0A1D5UGA8 (A0A1D5UGA8_WHEAT)

Entry version 20 (10 Feb 2021)
Sequence version 1 (30 Nov 2016)
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Protein
Submitted name:

Genome assembly, chromosome: II

Gene

CAMPLR22A2D_LOCUS5515

Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Genome assembly, chromosome: IIImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CAMPLR22A2D_LOCUS5515Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTriticum aestivum (Wheat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4565 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Pooideae › Triticodae › Triticeae › Triticinae › Triticum
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000019116 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced
  • UP000280104 Componenti: Chromosome ii

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

    Topology

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei12 – 30HelicalSequence analysisAdd BLAST19
    Transmembranei42 – 63HelicalSequence analysisAdd BLAST22
    Transmembranei83 – 104HelicalSequence analysisAdd BLAST22
    Transmembranei116 – 134HelicalSequence analysisAdd BLAST19
    Transmembranei140 – 158HelicalSequence analysisAdd BLAST19
    Transmembranei260 – 279HelicalSequence analysisAdd BLAST20
    Transmembranei291 – 310HelicalSequence analysisAdd BLAST20
    Transmembranei501 – 524HelicalSequence analysisAdd BLAST24
    Transmembranei578 – 599HelicalSequence analysisAdd BLAST22

    <p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

    Membrane

    <p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini48 – 362DUF4220InterPro annotationAdd BLAST315

    Region

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    <p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni631 – 651DisorderedSequence analysisAdd BLAST21

    Keywords - Domaini

    Transmembrane, Transmembrane helixSequence analysis

    Phylogenomic databases

    Identification of Orthologs from Complete Genome Data

    More...    OMAi    		SAMIFRY

    Family and domain databases

    Integrated resource of protein families, domains and functional sites

    More...    InterProi    		View protein in InterPro
    IPR025315, DUF4220
    IPR007658, DUF594

    Pfam protein domain database

    More...    Pfami    		View protein in Pfam
    PF13968, DUF4220, 1 hit
    PF04578, DUF594, 1 hit

    <p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

    <p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

    A0A1D5UGA8-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MVGGLIKVFN EWEIQLLVLL SFTLQLFLLF AGNLRRRRSN GFLRVLIWLA 
            60         70         80         90        100
    FLGADLVAVY ALGLLSRREN NITTIIDKGS QPLAFFWAPF LLIHLGGQDT 
           110        120        130        140        150
    VTAFSMEDNN LWLRHLLNLV VQVVLAFYVF WRSIRSLDSL GFLTSGVLVF 
           160        170        180        190        200
    VAGIIKYGER TWCLKRGSLK GLESSTRVLT TWSFLHLDPA IQGYSKAVYD 
           210        220        230        240        250
    ALRSVSYALH IFSARGYCMS NFYPPGDINQ TVKIGRLQLG LVYDELYTKA 
           260        270        280        290        300
    VVLRTKSAMI FRYISQLSIV VAFGLFHAIV DKQRYAKVDI AITYSLFIGG 
           310        320        330        340        350
    FFIEVWSIIL NSTTSPRTWL MLKRRKWERL AKLSWFIFSN DIIGLSEKKQ 
           360        370        380        390        400
    RWPSSIGQYD LVGWMNGTRG TRFSQRVMTV VIRVFVGFFG GEKVNIFWMS 
           410        420        430        440        450
    KVLDTWYMDA DEMTMACVAK EIIVLDYELR GMPTREWPNV GSMLAKRMQG 
           460        470        480        490        500
    FEQFFARTVV EMHVLTELLL NKYSRLLDSD MVASAEDYGS MVRVCRKLSN 
           510        520        530        540        550
    YMMYLLVAHP TMLPLTTSTA GLWINFQSPY KVSDLSKEMD KYDLQPTKET 
           560        570        580        590        600
    IEEMVHMWMR ILLYAASKSR AELHVAQLAN TGGELITFAW LVMAFFQIGD 
           610        620        630        640        650
    TQRRRISIMK TPNGETNAES KAYAFDVIAS TSEHGSSRPS SSPDERAVVI 

    E
    Length:651
    Mass (Da):74,401
    Last modified:November 30, 2016 - v1
    <p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2F39D66FC004AC17
    GO

    Sequence databases

    Select the link destinations:

    EMBL nucleotide sequence database

    More...    EMBLi

    GenBank nucleotide sequence database

    More...    GenBanki

    DNA Data Bank of Japan; a nucleotide sequence database

    More...    DDBJi
    Links Updated
    		LS480641 Genomic DNA Translation: SPT20882.1

    Genome annotation databases

    Ensembl plant genome annotation project

    More...    EnsemblPlantsi    		TraesCS2D02G559600.1; TraesCS2D02G559600.1; TraesCS2D02G559600

    Gramene; a comparative resource for plants

    More...    Gramenei    		TraesCAD_scaffold_007381_01G000700.1; TraesCAD_scaffold_007381_01G000700.1; TraesCAD_scaffold_007381_01G000700
    TraesCLE_scaffold_010998_01G000100.1; TraesCLE_scaffold_010998_01G000100.1; TraesCLE_scaffold_010998_01G000100
    TraesCS2D02G559600.1; TraesCS2D02G559600.1; TraesCS2D02G559600
    TraesPAR_scaffold_002135_01G000700.1; TraesPAR_scaffold_002135_01G000700.1; TraesPAR_scaffold_002135_01G000700
    TraesROB_scaffold_075948_01G000100.1; TraesROB_scaffold_075948_01G000100.1; TraesROB_scaffold_075948_01G000100
    TraesWEE_scaffold_026159_01G000100.1; TraesWEE_scaffold_026159_01G000100.1; TraesWEE_scaffold_026159_01G000100

    <p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

    <p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    		LS480641 Genomic DNA Translation: SPT20882.1

    3D structure databases

    Database of comparative protein structure models

    More...    ModBasei    		Search...

    SWISS-MODEL Interactive Workspace

    More...    SWISS-MODEL-Workspacei    		Submit a new modelling project...

    Genome annotation databases

    EnsemblPlantsiTraesCS2D02G559600.1; TraesCS2D02G559600.1; TraesCS2D02G559600
    GrameneiTraesCAD_scaffold_007381_01G000700.1; TraesCAD_scaffold_007381_01G000700.1; TraesCAD_scaffold_007381_01G000700
    TraesCLE_scaffold_010998_01G000100.1; TraesCLE_scaffold_010998_01G000100.1; TraesCLE_scaffold_010998_01G000100
    TraesCS2D02G559600.1; TraesCS2D02G559600.1; TraesCS2D02G559600
    TraesPAR_scaffold_002135_01G000700.1; TraesPAR_scaffold_002135_01G000700.1; TraesPAR_scaffold_002135_01G000700
    TraesROB_scaffold_075948_01G000100.1; TraesROB_scaffold_075948_01G000100.1; TraesROB_scaffold_075948_01G000100
    TraesWEE_scaffold_026159_01G000100.1; TraesWEE_scaffold_026159_01G000100.1; TraesWEE_scaffold_026159_01G000100

    Phylogenomic databases

    OMAiSAMIFRY

    Family and domain databases

    InterProiView protein in InterPro
    IPR025315, DUF4220
    IPR007658, DUF594
    PfamiView protein in Pfam
    PF13968, DUF4220, 1 hit
    PF04578, DUF594, 1 hit

    ProtoNet; Automatic hierarchical classification of proteins

    More...    ProtoNeti    		Search...

    MobiDB: a database of protein disorder and mobility annotations

    More...    MobiDBi    		Search...

    <p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

    <p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1D5UGA8_WHEAT
    <p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1D5UGA8
    <p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
    Last sequence update: November 30, 2016
    Last modified: February 10, 2021
    This is version 20 of the entry and version 1 of the sequence. See complete history.
    <p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

    <p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

    Keywords - Technical termi

    Reference proteomeImported
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