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Entry version 26 (02 Dec 2020)
Sequence version 1 (30 Nov 2016)
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Protein
Submitted name:

Alstrom syndrome protein 1 homolog

Gene

Alms1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Alstrom syndrome protein 1 homologImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Alms1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 6

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1934606, Alms1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, CytoskeletonARBA annotation

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
A0A1D5RMI8

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
A0A1D5RMI8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A0A1D5RMI8, baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini3594 – 3716ALMS_motifInterPro annotationAdd BLAST123

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 116DisorderedSequence analysisAdd BLAST116
Regioni369 – 393DisorderedSequence analysisAdd BLAST25
Regioni616 – 643DisorderedSequence analysisAdd BLAST28
Regioni1084 – 1156DisorderedSequence analysisAdd BLAST73
Regioni1432 – 1455DisorderedSequence analysisAdd BLAST24
Regioni1564 – 1584DisorderedSequence analysisAdd BLAST21
Regioni1611 – 1658DisorderedSequence analysisAdd BLAST48
Regioni2890 – 2921DisorderedSequence analysisAdd BLAST32
Regioni2933 – 2954DisorderedSequence analysisAdd BLAST22
Regioni3128 – 3154DisorderedSequence analysisAdd BLAST27
Regioni3207 – 3273DisorderedSequence analysisAdd BLAST67
Regioni3291 – 3340DisorderedSequence analysisAdd BLAST50
Regioni3471 – 3496DisorderedSequence analysisAdd BLAST26

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili2111 – 2138Sequence analysisAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 28AcidicSequence analysisAdd BLAST28
Compositional biasi68 – 86PolyampholyteSequence analysisAdd BLAST19
Compositional biasi95 – 115Pro-richSequence analysisAdd BLAST21
Compositional biasi1135 – 1150PolarSequence analysisAdd BLAST16
Compositional biasi1624 – 1641PolyampholyteSequence analysisAdd BLAST18
Compositional biasi2890 – 2904PolarSequence analysisAdd BLAST15
Compositional biasi3128 – 3152PolyampholyteSequence analysisAdd BLAST25
Compositional biasi3212 – 3233PolyampholyteSequence analysisAdd BLAST22
Compositional biasi3256 – 3273PolarSequence analysisAdd BLAST18
Compositional biasi3291 – 3327PolarSequence analysisAdd BLAST37
Compositional biasi3479 – 3496PolyampholyteSequence analysisAdd BLAST18

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000153123

Identification of Orthologs from Complete Genome Data

More...
OMAi
HMLNKGV

Database of Orthologous Groups

More...
OrthoDBi
9342at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR028781, ALMS1
IPR029299, ALMS_motif
IPR040972, ALMS_repeat

The PANTHER Classification System

More...
PANTHERi
PTHR21553:SF22, PTHR21553:SF22, 9 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15309, ALMS_motif, 1 hit
PF18727, ALMS_repeat, 11 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A1D5RMI8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEPEDLPWPD ELEEEEEEEE EEGEEEEGKK EVENASAAAT EEALTSEESG
60 70 80 90 100
RLEEFEEAGP DLDFNYESQR QESSDEEEDE LAKAWLQAHP DRPGSAFSLP
110 120 130 140 150
PPTPPPPPPP LSPRLRYTPV EHLGKTEVVP LTCRVWQQSS YQDNSRAQFS
160 170 180 190 200
NSSTMLLETG VRWGSEEDQR TESWHCLPQE RDSSQTLAMS QTEIGRVEGT
210 220 230 240 250
EVPDLPSQEG GLPAQSQCPG KKPKLNVLCS PLLVIQDNFA APDLPLLTCL
260 270 280 290 300
IQDQEEVEPD SLFQQSELEF APLRGIPDKS EDSEWLARPS EVSEALIQAT
310 320 330 340 350
SETSSDLANS CFSISQHPLT GSTTFGSQHS LFMFEQENNG ETVPSNAPDE
360 370 380 390 400
LKSPKDSDHD VLCSYMSWPS EKDTQQPEGN LADKDQVSTS TLSDISDESI
410 420 430 440 450
AAKRNNSFGV SCSCNQYWNQ KALQQTEACL ASKDHASFPC KITPLPNKVP
460 470 480 490 500
YSFLQRMLKR GKEAPLIADN HLENVCLRTP AEDEMSLKNE SLEGFEGNED
510 520 530 540 550
LQKELSQFFK QKETRNTWAS SQVHTRYPEI KYIGTVAVPD SKKQVAEPYI
560 570 580 590 600
LYRGLDISDC PLPTVKSNLD ETSEQLYFQE ERNQKAASTF DEKNVDATEN
610 620 630 640 650
VAFEAIIASI ESSNQESLIS ETQTDNTELL ADDSEEKEPL KPDLSPLNCK
660 670 680 690 700
NEISFIDKLK YLKYQSTPGV FEPADSKSLL YKEDDASSLY LYPDLKSSIN
710 720 730 740 750
APQNMLNKPV SVTLELKSSL SEKACNQAVG LETQSPSFQY GISNLDLTEK
760 770 780 790 800
VGSSSISFAM KIATSESWVL EDLKQQTFEE VADSSDYKLE GLQGKAESGV
810 820 830 840 850
LTRCGDAKYS SLYENLGAQS ERIAVLQREV GCSNLGISQA SPSSLPSFVP
860 870 880 890 900
QEPTSEPEYH SSNLRMLRVS PDTLLTTHTH SAGSADQKIG AAVVSSAYSQ
910 920 930 940 950
EIKPGSFHQE ELPDRHLNEE IRKVSPALRT AGQKPEMLPV QSSSYSKGMK
960 970 980 990 1000
SIFYQHPVSH GHQGKEPLSV SAVCGSAGNK AFHQLSTLSD SLLTEETWPV
1010 1020 1030 1040 1050
SVIPGLGNQK TPLPSEFSLS YSHRGKNLPE DVVKVSTDSG SAHKKADILT
1060 1070 1080 1090 1100
ASSRTYQHKM KPANIYHQEL PDSRVPIGTR KVAFESGPAG QKSGVSHPYG
1110 1120 1130 1140 1150
EMPSVFYQQG LPDRHSAKSP TKTFIPGPAD QKTDLSPVPP TSSSHAEKPV
1160 1170 1180 1190 1200
SPYQLTLPGS HLPEDVFKAS SVCKSSDELS GITALTSASY SYKGRPNSSY
1210 1220 1230 1240 1250
QQKFPDSHLN EEAQKILGTT GTVDQKTVTP TMSSSFLQKE KPSIFYQQTL
1260 1270 1280 1290 1300
PDGGLSEEDL QVSAVPWPAD QNIAIPTVTS AAFSQREKPR IFYQQTLSVD
1310 1320 1330 1340 1350
RLPGEPLNVL GTSGPPDQNT GAPTVTPSSY FPGEESIIFY QAGFPGNTLS
1360 1370 1380 1390 1400
AMSFKVPRIS GSTEQTNVTT GSSSSYSVGE KSIIFYHQAL PDGRLPQEAS
1410 1420 1430 1440 1450
PAPADLNTGE PPMYLASCSV GVKPIIFYQQ PMSDSQRTKG HKESDVPGPT
1460 1470 1480 1490 1500
DQKTGIATVH STSQSYIGRR TVSYQKEFPD LSEKALKVLG DVGSTEQKTQ
1510 1520 1530 1540 1550
IPVVSSALLH KEGPSAYQED LPDLTEEPLQ ILGVSEEVSS SSYQRKLPDH
1560 1570 1580 1590 1600
IEVFLKSVGS GSADRKTGAQ IVSSSREKSS GFHQQELPNT GGDAVDAFHP
1610 1620 1630 1640 1650
EPVVQEVRKV QTPGAPAGPS SSHFHKEKLS DYQKASPHRD LTESSLKAST
1660 1670 1680 1690 1700
VPGLSDQKKK PAVSSGFCLH KEKHEISASA LLNCQTAELL TVTQRSCLHR
1710 1720 1730 1740 1750
EDPAISTVIK PDDQKIPLPT TFHGSSDQKV KPVIFVQKQL RDRDQSEDIP
1760 1770 1780 1790 1800
KISTVSEPTV VNTVLPVLLP GSYSHREKSD SFYPQELPDG HLTEVDLKVS
1810 1820 1830 1840 1850
SGLGQADQIS GLPTGIPGTY SHSEKHQLIS EHVQELMDNL NSSESSCLSV
1860 1870 1880 1890 1900
DSMPLNSQID DGVIICKPES LGFANAGCEE MQNIDRGSKT LKEIQTLLME
1910 1920 1930 1940 1950
AENMALKRCN FSVPLVPFRD VNDVSFIRSK KVVCFKESST TDVCTQRESF
1960 1970 1980 1990 2000
VEEVPHIEYV QKDIGTQTNL KYQRGVGNWE FISSATFRSP LQEAEGTARM
2010 2020 2030 2040 2050
AYDETFRQYK AARSVMRSEP EGCSTGIGNK MIIPMMTIIK SDSSSDVSDG
2060 2070 2080 2090 2100
CCSWDNNLPE SLESVSDVFL NFFPYTSPKT SITDSREEEW LSESEDGYGS
2110 2120 2130 2140 2150
TDSLAAHVKY LLQCETSLNQ AKQILKNAEE EEYRVRTQAW NLKFNLGRDR
2160 2170 2180 2190 2200
GYSISELNED DRRKVEEIKA KLFGHGRATH MSEGLRSPQG IGCLPEAVCS
2210 2220 2230 2240 2250
RIIIESHEKG CFRTLTAEQP RPDSCHCAFR SVEPSDLIRG HRSPSSWRGR
2260 2270 2280 2290 2300
HINLSRSIEQ SNPCFKVGSS FQLQSHPPFQ KLLPDDIKIS KGVGMPVHAY
2310 2320 2330 2340 2350
MDPQPSELVE PTCVPAKEMD FPSSSQILPP EPKKQFTTAI TFSSHEHSEC
2360 2370 2380 2390 2400
ISDSSGCKVG VTADSQCSGP SLGVFKPHIP EEQISPRDLK QKTSFQSSLE
2410 2420 2430 2440 2450
RHGSTPVTIL ADGSRQRQKL PVDFEHSHQK EKLLQRLGFK VSHSEPNVST
2460 2470 2480 2490 2500
NVSNFKGVQF SGKDTIVSQD KLTSTVEVKE KNVTVTPDLP SCIFLEQPEL
2510 2520 2530 2540 2550
FEESHTPHTD LQMRKYPSPS CPEIASRIFL EQPKLSEQSK APHVDREIRE
2560 2570 2580 2590 2600
DHSFFPKCQD YIVADPSPDF PDQQQCKPPD VVGHTRKQNS LLSEGQDYEL
2610 2620 2630 2640 2650
EEVQHIPQSY FSNMVNVEAK VSDAISQSAP DHCTAASTPP SNRKALSCVR
2660 2670 2680 2690 2700
ITLCPKTSSK LDSGTLGERF HSLDPASKTR INSEFNSDLR IISSRSLEPT
2710 2720 2730 2740 2750
SKLLTCKPVA QDQESLVFLG PKSPLDLQVA QSSLPDSKTI FQDLKTKPPQ
2760 2770 2780 2790 2800
NSQIVTSRQT QVNISHLEGY SKPEGTPVSA DGSQEQSKVS FTTSFGKLSS
2810 2820 2830 2840 2850
DAITQITTES PEKTTFSSEI FIHADDRGQG ILDPMAQKPS RFASSSSVQQ
2860 2870 2880 2890 2900
IPASHGKDAQ PVLLPYKPSG SSKMYYVPLL KRVPSYLDSK SDTTVESSHS
2910 2920 2930 2940 2950
GSNDAIAPDF PPQMLGTRDD DLSNTVNIKH KEGIYSKRAA TKGKNPSQKG
2960 2970 2980 2990 3000
DAAAPVQMPI TWDENVLDEN QEEVISRGVV IKMAGPEEMS SLEKDLAGPS
3010 3020 3030 3040 3050
DITVQDRKTE NLPDTKSIKQ KEGSLEIESE CHSAFENTAH SVFRSAKFYF
3060 3070 3080 3090 3100
HHPVHLPHEQ DFCHESLGRS VFMQHSWKDF FHHHSGHSCL PPPGPSSDKL
3110 3120 3130 3140 3150
DKTKMDYTRI KSLSINLNLG EHEKIHTIKN QARDPKGKRQ ANEQKKDQKV
3160 3170 3180 3190 3200
TPELTTECPV SLNELWNRYQ ERQKQQNPSG ACDTKELSLV ERLDRLAKLL
3210 3220 3230 3240 3250
QNPITHSLRA SESAQDDSRG GHRAREWTGR RQQKQKGKQH RKWSKSLERG
3260 3270 3280 3290 3300
QSTGDFRKSK VFSPHQGGKS SQFKIEQIKL DKYILRKEPG FNNVSNTSLD
3310 3320 3330 3340 3350
SRPSEESVSL TDSPNIFSST DSPVDSDVLT PTDRDMPLNE RSSSISTIDT
3360 3370 3380 3390 3400
VRLIQAFGQD RLSLSPRRIK LYSTVTSQRR RYLEQPCKHN RKALNTACPQ
3410 3420 3430 3440 3450
MTSEHSRRRH IQVANHMTSS DSVSSPGSLL SLDSALSNEE TVRMVSKGVQ
3460 3470 3480 3490 3500
AGNLEIVAGV KKYTQDVGVT FPTPSSSEAR LEEDSDVTSS SEEKAKEKKF
3510 3520 3530 3540 3550
LSNYLQTKNL RKNKPNPCAG VSWFVPVESG QSGSKKENLP KIYRPVISWF
3560 3570 3580 3590 3600
EPVTKTKPWR EPLREQNWQA QCMNSRGSLG GPGRDSGQVS LRPFVRATLQ
3610 3620 3630 3640 3650
ESLQLHRPDF ISHSGERIKR LKLLVQERKL QSLFQSEREA LFHSARPLPR
3660 3670 3680 3690 3700
RVLLAVQKNK PIGKKEMIQR TRRIYEQLPE VKKKREEEKR KSEYKSYWLR
3710 3720
AQHYKMKVTN HLLGRKVPWD
Length:3,720
Mass (Da):412,589
Last modified:November 30, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3138C6F538E7C515
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8K4E0ALMS1_MOUSE
Alstrom syndrome protein 1 homolog
Alms1 Kiaa0328
3,251Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC104743 Genomic DNA No translation available.
AC162313 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
XP_006506113.1, XM_006506050.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000213058; ENSMUSP00000148796; ENSMUSG00000063810

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
236266

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104743 Genomic DNA No translation available.
AC162313 Genomic DNA No translation available.
RefSeqiXP_006506113.1, XM_006506050.3

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Proteomic databases

EPDiA0A1D5RMI8
jPOSTiA0A1D5RMI8

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
8144, 113 antibodies

Genome annotation databases

EnsembliENSMUST00000213058; ENSMUSP00000148796; ENSMUSG00000063810
GeneIDi236266

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
7840
MGIiMGI:1934606, Alms1

Phylogenomic databases

GeneTreeiENSGT00940000153123
OMAiHMLNKGV
OrthoDBi9342at2759

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
236266, 1 hit in 18 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Alms1, mouse

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

ExpressionAtlasiA0A1D5RMI8, baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR028781, ALMS1
IPR029299, ALMS_motif
IPR040972, ALMS_repeat
PANTHERiPTHR21553:SF22, PTHR21553:SF22, 9 hits
PfamiView protein in Pfam
PF15309, ALMS_motif, 1 hit
PF18727, ALMS_repeat, 11 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1D5RMI8_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1D5RMI8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
Last sequence update: November 30, 2016
Last modified: December 2, 2020
This is version 26 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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