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Protein
Submitted name:

Receptor-type tyrosine-protein phosphatase delta

Gene

Ptprd

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Receptor-type tyrosine-protein phosphatase deltaImported
Gene namesi
Name:PtprdImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:97812 Ptprd

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei176 – 199HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

ExpressionAtlasiA0A1D5RLZ1 baseline and differential

Structurei

3D structure databases

SMRiA0A1D5RLZ1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000118900

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 12 potential isoforms that are computationally mapped.Show allAlign All

A0A1D5RLZ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
AGGLQHRVTA KTAPDVLRTK PAFIGKTNLD GMITVQLPDV PANENIKGYY
60 70 80 90 100
IIIVPLKKSR GKFIKPWESP DEMELDELLK EISRKRRSIR YGREVELKPY
110 120 130 140 150
IAAHFDVLPT EFTLGDDKHY GGFTNKQLQS GQEYVFFVLA VMDHAESKMY
160 170 180 190 200
ATSPYSDPVV SMDLDPQPIT DEEEGLIWVV GPVLAVVFII CIVIAILLYK
210 220 230 240 250
SKPDRKRAES ESRKSSLPNS KEVPSHHPTD PVELRRLNFQ TPALSSNSVP
260 270 280 290
YASLIGSVSS LSSQTTTQSI YDNNSLPRFA RKGMASHPPI PILELA
Length:296
Mass (Da):33,019
Last modified:November 30, 2016 - v1
Checksum:i46FB8360D24C9631
GO

Computationally mapped potential isoform sequencesi

There are 12 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q64487PTPRD_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,912Annotation score:
B9EJA3B9EJA3_MOUSE
Protein tyrosine phosphatase, recep...
Ptprd
1,508Annotation score:
E9Q7I7E9Q7I7_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,505Annotation score:
E9PVW8E9PVW8_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,506Annotation score:
G3UX60G3UX60_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,502Annotation score:
G3UY75G3UY75_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,890Annotation score:
G3UYU6G3UYU6_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,495Annotation score:
G3UWK6G3UWK6_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,505Annotation score:
Q5SPA9Q5SPA9_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
1,254Annotation score:
G3UYR6G3UYR6_MOUSE
Receptor-type tyrosine-protein phos...
Ptprd
98Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei296Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844848 Genomic DNA No translation available.
AL845158 Genomic DNA No translation available.
AL845333 Genomic DNA No translation available.
AL845335 Genomic DNA No translation available.
AL845508 Genomic DNA No translation available.
AL845517 Genomic DNA No translation available.
AL929181 Genomic DNA No translation available.
AL929553 Genomic DNA No translation available.
AL954675 Genomic DNA No translation available.
BX296523 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000212365; ENSMUSP00000148560; ENSMUSG00000028399

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844848 Genomic DNA No translation available.
AL845158 Genomic DNA No translation available.
AL845333 Genomic DNA No translation available.
AL845335 Genomic DNA No translation available.
AL845508 Genomic DNA No translation available.
AL845517 Genomic DNA No translation available.
AL929181 Genomic DNA No translation available.
AL929553 Genomic DNA No translation available.
AL954675 Genomic DNA No translation available.
BX296523 Genomic DNA No translation available.

3D structure databases

SMRiA0A1D5RLZ1
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000212365; ENSMUSP00000148560; ENSMUSG00000028399

Organism-specific databases

MGIiMGI:97812 Ptprd

Phylogenomic databases

GeneTreeiENSGT00760000118900

Miscellaneous databases

ChiTaRSiPtprd mouse
SOURCEiSearch...

Gene expression databases

ExpressionAtlasiA0A1D5RLZ1 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA0A1D5RLZ1_MOUSE
AccessioniPrimary (citable) accession number: A0A1D5RLZ1
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
Last sequence update: November 30, 2016
Last modified: September 12, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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