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Entry version 17 (07 Oct 2020)
Sequence version 1 (30 Nov 2016)
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Protein
Submitted name:

Uncharacterized protein

Gene

Q5W_15460

Organism
Hydrogenophaga sp. PBC
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:Q5W_15460Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHydrogenophaga sp. PBCImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri795665 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeHydrogenophaga
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005985 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini37 – 130LPD22InterPro annotationAdd BLAST94
Domaini781 – 1028LPD37InterPro annotationAdd BLAST248

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 21DisorderedSequence analysisAdd BLAST21

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1246 – 1266Sequence analysisAdd BLAST21
Coiled coili1482 – 1502Sequence analysisAdd BLAST21
Coiled coili1686 – 1706Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
142817at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040738, LPD22
IPR041196, LPD37

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18834, LPD22, 1 hit
PF18853, LPD37, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A1C9VHP3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSLYDELAA QPAPQPGAAQ PTLYDDLVET ERQERAVRGS LTATAQTTPE
60 70 80 90 100
RAAQLNYLAQ VSGMPRAVVE TDEGSAKAVA QLREIWDASA DSPVLRAKLA
110 120 130 140 150
NPQFTELAKD DVGVLSQIER GVQATTRYIM GADGRGGLAG DVKAGFHRSS
160 170 180 190 200
AATSGAFRAV AETLAVPFDF LEQFTAIGGN PLRRLAEGFE SIAQGQTRIA
210 220 230 240 250
DRTTSGVFGV SAGVQSAVQN SKYLPLVAAG PAGAAAALTG MVAESFGSSY
260 270 280 290 300
QTARDRGVSQ AASLIYGASD AAIEYATERI PLQRLIGDIA VDAGFVRTLG
310 320 330 340 350
RQIALEVPGE QIATVLQDMN EWAVLNPERS FRDYLAERPS AAAETLIATV
360 370 380 390 400
IGTGGNVALT QGVDRALNGY LQAQVAQTEA GQQALAVQQL LEMSAQSRLR
410 420 430 440 450
ERDPAQFREA VAEMARQAGT ESVFVDAAVL NQLPPEIQQQ LPGLAEQLAD
460 470 480 490 500
ALAANSTVEL KLADVLAVAP GSGVEQTLVD NIRMAPDALT AAEATAAGQE
510 520 530 540 550
AQTLLQQEAT RVIAQAGDAV QAQAAAEQVK ADVLGQLNAT GRFGAEVNDA
560 570 580 590 600
YATLVRDFYT VLGQRLGVSP AQAYQRYPLR VAGQGQGTAA VLEQESPEFK
610 620 630 640 650
AWFGDSKVVD ADGKPLVVYH GTRADFDTFS PEATMSAGRV ESEYGRAFYF
660 670 680 690 700
TTDPATAESY GESARQDGAH RVLPVYLSLR NPYIVDLTKV AVRSVYAPGH
710 720 730 740 750
DPEFVNRLKA KGHDGIIVVD EDFDGNLPRG TENLQAFASE VVVFEPTQIK
760 770 780 790 800
SAIGNSGTYD PNDPNILNQS ADPADDIATT LLELGRGEGL YQLPRSQATD
810 820 830 840 850
IAQMAAEKDL EVRPVDRNAA DSTEWMLANT TPEAEGTESW VVSTSDGRLG
860 870 880 890 900
TITRDGNEVY INVSAVGEGG GGSAIYDLVA NYALNNGLVF IGDPNGVSEA
910 920 930 940 950
AMRRRLENML SSAVKYGTTD HIAPHPDQLL GNTVQGIAPL KWTPGDTLGN
960 970 980 990 1000
IRSLVEASLA TTEAAAPLTT SEVQFDVDTQ QFRQPDGTPA DAAVVRSVLS
1010 1020 1030 1040 1050
FEPRVRGTGA PGQTTVQRAA LYRALLQGPD QRRALLAAVR GQQGERGEGL
1060 1070 1080 1090 1100
GRTFYQRAKG TFDPAKLLIT LNDGADLSTF LHETGHFFLE VTADLAAAPD
1110 1120 1130 1140 1150
APAQVQQDMA ALLKWFGVPD LQTWQAMSLD EQRPHHERFA ESFEQYLLEG
1160 1170 1180 1190 1200
RAPSRDLRSL FRKFRSFLTR VYRSLQSFTE GRDVELSDDV RQVMDRLLAT
1210 1220 1230 1240 1250
DEQIAEAQTL AGMDRDQAAT DEALEKFQAR SLRDLKWAVN ARAKVIAKLQ
1260 1270 1280 1290 1300
AQARNLRKGI EAEVRAEVEE VPVYKAMRWL REDTKLSIEG LESLYMGEGD
1310 1320 1330 1340 1350
RYALLDWKPL VDRRMAGKTG VHPDVAADMF GFPSGDALVR AILAAEPLSE
1360 1370 1380 1390 1400
VVQGRTDQRM LERHGDLIDQ RAIEEAATEA IHNEARARAL ATELAAQREI
1410 1420 1430 1440 1450
GANRRETGQV DARGRALTVN ATLEAARQFA ENVAGRKAIG DLKSAAYAHL
1460 1470 1480 1490 1500
QAERRAAKAW EAATAKGDTQ AAVQAKQDQL LNHEIYRALV EAQRQVAKAE
1510 1520 1530 1540 1550
ALFARVLKGN PERLVDRGYD PDVVAATRAI LAAYGLAPRI GKTAVEYLEL
1560 1570 1580 1590 1600
VEKNDPDLYA VLKPSVEATL ANAKPYDRLS VDELGALVAE VEAMQQLARR
1610 1620 1630 1640 1650
SRQMEVDGNL MDLQEAADQL KARMEAIGVP LQMPGQDAAL TPKQERTRWL
1660 1670 1680 1690 1700
QFARALGRRM EQWSEAMDGG RGAFTKLVYG PVKAAADRYR ADRAKYRKQY
1710 1720 1730 1740 1750
QQLVDRMAPA LRPGEIAAPE LGYTFGRGHN GIGHAELLHA LLHTGNESNK
1760 1770 1780 1790 1800
RKLLLGRGWA SENGDGSLDT SRWDAFVARM QSSGYLAKEH YDFAQGVWDL
1810 1820 1830 1840 1850
LESTKPLAQK AHRDVFGRYF AEVTADAFET PYGAYRGGHV PAQADPRIVT
1860 1870 1880 1890 1900
DAGLRKLAEM ENENMAFSFP TTSKGFTKAR TDYNRPLILD LRTIGQHLDK
1910 1920 1930 1940 1950
VLLFSHMEPA VRDVNRLLRD RGVSARLSKI DPAAYEGALI PWLNRSARQQ
1960 1970 1980 1990 2000
VETPVVGDGR ISRVLSVMRS RAGMSLMFAN VSNTAQQITG FALAAVKVKP
2010 2020 2030 2040 2050
SKLLQATAQY IANPKKTADF VAEQSIFMRD RMRNEVAAIN DAMDDILLKP
2060 2070 2080 2090 2100
STYAKTQTWA QRHAYFLQAA ADNVMSPIVW VGAYNQALET GQTETEAAKA
2110 2120 2130 2140 2150
GDAAVRQTQG STLPEDVSRI ETGPAAARMF TQFVSYFNML ANTNSAELTK
2160 2170 2180 2190 2200
IARDIGMKKG AGKALYVVTM GLLVPIWVAE AIAIAFRGGP EDEDGDGWLD
2210 2220 2230 2240 2250
DWLAAVFGMG TIKGSLAMVP FVGQAANAGL ARLNDNPADD RISLSPAVSI
2260 2270 2280 2290 2300
LEGAVGAPHS VYQALAEDGS ARKAVRDLAS AISLATGLPA HAAARPLGYL
2310 2320 2330
AGMADDRVAP TSGLDLARGL VTGAVSPESR Q
Length:2,331
Mass (Da):251,658
Last modified:November 30, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iBEBB068882EDF32D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP017311 Genomic DNA Translation: AOS80267.1

NCBI Reference Sequences

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RefSeqi
WP_069902962.1, NZ_CP017311.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AOS80267; AOS80267; Q5W_15460

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hyb:Q5W_15460

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP017311 Genomic DNA Translation: AOS80267.1
RefSeqiWP_069902962.1, NZ_CP017311.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiAOS80267; AOS80267; Q5W_15460
KEGGihyb:Q5W_15460

Phylogenomic databases

OrthoDBi142817at2

Family and domain databases

InterProiView protein in InterPro
IPR040738, LPD22
IPR041196, LPD37
PfamiView protein in Pfam
PF18834, LPD22, 1 hit
PF18853, LPD37, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1C9VHP3_9BURK
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1C9VHP3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2016
Last sequence update: November 30, 2016
Last modified: October 7, 2020
This is version 17 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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