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Protein

Eukaryotic translation initiation factor 5A

Gene

SORBI_3002G363100

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein biosynthesisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Eukaryotic translation initiation factor 5AUniRule annotation
Short name:
eIF-5AUniRule annotation
Gene namesi
ORF Names:SORBI_3002G363100Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 2

PTM / Processingi

Post-translational modificationi

eIF-5A seems to be the only eukaryotic protein to have a hypusine residue which is a post-translational modification of a lysine by the addition of a butylamino group (from spermidine).UniRule annotation

Keywords - PTMi

HypusineUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-5A family.UniRule annotation

Phylogenomic databases

OMAiKKYEDMC

Family and domain databases

Gene3Di2.30.30.30, 1 hit
InterProiView protein in InterPro
IPR001884 IF5A-like
IPR012340 NA-bd_OB-fold
IPR014722 Rib_L2_dom2
IPR019769 Trans_elong_IF5A_hypusine_site
IPR020189 Transl_elong_IF5A_C
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR11673 PTHR11673, 1 hit
PfamiView protein in Pfam
PF01287 eIF-5a, 1 hit
PIRSFiPIRSF003025 eIF5A, 1 hit
SMARTiView protein in SMART
SM01376 eIF-5a, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00037 eIF_5A, 1 hit
PROSITEiView protein in PROSITE
PS00302 IF5A_HYPUSINE, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1B6QFD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDSEEHHFE SKADAGASKT YPQQAGTVRK NGFLVIKGRP CKVVEVSTSK
60 70 80 90 100
TGKHGHAKCH FVAIDIFNGK KLEDIVPSSH NCDIPHVNRT EYQLIDISED
110 120 130 140 150
GFVSLLTSDG NTKDDLRLPT DETLVAQIKE GFESGKDLVV TVQSAMGEEQ
160
ICALKDIGPK
Length:160
Mass (Da):17,454
Last modified:November 2, 2016 - v1
Checksum:i778FA8D9B0B09EDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000761 Genomic DNA Translation: KXG36613.1

Genome annotation databases

EnsemblPlantsiKXG36613; KXG36613; SORBI_3002G363100
GrameneiKXG36613; KXG36613; SORBI_3002G363100

Similar proteinsi

Entry informationi

Entry nameiA0A1B6QFD0_SORBI
AccessioniPrimary (citable) accession number: A0A1B6QFD0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2016
Last sequence update: November 2, 2016
Last modified: March 28, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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