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Protein

Alpha-amylase

Gene

SORBI_3007G156500

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei206NucleophileUniRule annotation1
Active sitei231Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
ORF Names:SORBI_3007G156500Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 7

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26UniRule annotationAdd BLAST26
ChainiPRO_501060515627 – 438Alpha-amylaseUniRule annotationAdd BLAST412

Expressioni

Gene expression databases

ExpressionAtlasiA0A1B6PI12 baseline

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 366AamyInterPro annotationAdd BLAST340
Domaini367 – 427Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1B6PI12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKHSSSLCLL FLVALCISLA CGLVQAQVLF QGFNWESCKQ PGGWYNRLKA
60 70 80 90 100
QVDDIANAGV THVWLPPPSH SVSPQGYMPG RLYDLDASKY GTAAELRSLI
110 120 130 140 150
AAFHGRRIQC VADIVINHRC AEKKDARGIY CIFEGGTGDG RLDWGPGMIC
160 170 180 190 200
SDDTEYSDGT GHRDTGEAFA AAPDVDHLNE RVRRELSAWL NWLKSDDVGF
210 220 230 240 250
DGWRLDFAKG YSPAVARMYV ESTAPSFVVA EIWNSLTLSG DGKPSPNQDQ
260 270 280 290 300
CRQELVNWVQ AVGGPAMAFD FTTKGLLQAG VQGELWRLRD SSGKAAGMIG
310 320 330 340 350
WMPEKAVTFV DNHDTGSTQK LWPFPSDKVM QGYAYILTHP GVPCIFYDHM
360 370 380 390 400
FDWNLKQEIS TLSAIRARNG IHAGSKLRIL VADADAYVAV VDEKVMVKIG
410 420 430
TRYDVSNVIP SDFHPAAHGK DYCVWEKGSL RVPAGRHL
Length:438
Mass (Da):48,259
Last modified:November 2, 2016 - v1
Checksum:iD2B0256A41ED5A75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000766 Genomic DNA Translation: KXG25319.1

Genome annotation databases

EnsemblPlantsiKXG25319; KXG25319; SORBI_3007G156500
GrameneiKXG25319; KXG25319; SORBI_3007G156500

Similar proteinsi

Entry informationi

Entry nameiA0A1B6PI12_SORBI
AccessioniPrimary (citable) accession number: A0A1B6PI12
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2016
Last sequence update: November 2, 2016
Last modified: July 18, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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