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Protein
Submitted name:

Trinucleotide repeat-containing gene 6C protein

Gene

TNRC6C

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Trinucleotide repeat-containing gene 6C proteinImported
Gene namesi
Name:TNRC6CImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

HGNCiHGNC:29318 TNRC6C

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000078687

PTM / Processingi

Proteomic databases

EPDiA0A1B0GU24
PeptideAtlasiA0A1B0GU24

Expressioni

Gene expression databases

ExpressionAtlasiA0A1B0GU24 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1140 – 1185UBAInterPro annotationAdd BLAST46

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 28Sequence analysisAdd BLAST28
Coiled coili1396 – 1427Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00410000025966
OMAiPINAMQT

Family and domain databases

CDDicd12713 RRM_TNRC6C, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR019486 Argonaute_hook_dom
IPR026805 GW182_M_dom
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR032226 TNRC6_PABC-bd
IPR033499 TNRC6C
IPR034927 TNRC6C_RRM
IPR015940 UBA
IPR009060 UBA-like_sf
PANTHERiPTHR13020:SF9 PTHR13020:SF9, 1 hit
PfamiView protein in Pfam
PF10427 Ago_hook, 1 hit
PF12938 M_domain, 1 hit
PF16608 TNRC6-PABC_bdg, 1 hit
PF00627 UBA, 1 hit
SMARTiView protein in SMART
SM00165 UBA, 1 hit
SUPFAMiSSF46934 SSF46934, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50030 UBA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1B0GU24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEKKKKKQE EKKKKEGAQK KAADQKTKVP EPTKTCSSQP QPAGTSTSTS
60 70 80 90 100
TSTISSSNNG KRASASGQQP AASRYLPREV PPRFRQQEQK QLLKRGQPLP
110 120 130 140 150
TGTLTSVSPT QGAGPAGVSP PPLPGAGTQH HPSKLQPDLS HSGLADHYEN
160 170 180 190 200
SHWGQQPTYR SEANCSWDKV IIDRTDKEAW PSITGTETES ASECTTDTDS
210 220 230 240 250
ASNCGSENSS MATGSAQGNF TGHTKKTNGN NGTNGALVQS PSNQSALGAG
260 270 280 290 300
GANSNGSAAR VWGVATGSSS GLAHCSVSGG DGKMDTMIGD GRSQNCWGAS
310 320 330 340 350
NSNAGINLNL NPNANPAAWP VLGHEGTVAT GNPSSICSPV SAIGQNMGNQ
360 370 380 390 400
NGNPTGTLGA WGNLLPQEST EPQTSTSQNV SFSAQPQNLN TDGPNNTNPM
410 420 430 440 450
NSSPNPINAM QTNGLPNWGM AVGMGAIIPP HLQGLPGANG SSVSQVSGGS
460 470 480 490 500
AEGISNSVWG LSPGNPATGN SNSGFSQGNG DTVNSALSAK QNGSSSAVQK
510 520 530 540 550
EGSGGNAWDS GPPAGPGILA WGRGSGNNGV GNIHSGAWGH PSRSTSNGVN
560 570 580 590 600
GEWGKPPNQH SNSDINGKGS TGWESPSVTS QNPTVQPGGE HMNSWAKAAS
610 620 630 640 650
SGTTASEGSS DGSGNHNEGS TGREGTGEGR RRDKGIIDQG HIQLPRNDLD
660 670 680 690 700
PRVLSNTGWG QTPVKQNTAW EFEESPRSER KNDNGTEAWG CAATQASNSG
710 720 730 740 750
GKNDGSIMNS TNTSSVSGWV NAPPAAVPAN TGWGDSNNKA PSGPGVWGDS
760 770 780 790 800
ISSTAVSTAA AAKSGHAWSG AANQEDKSPT WGEPPKPKSQ HWGDGQRSNP
810 820 830 840 850
AWSAGGGDWA DSSSVLGHLG DGKKNGSGWD ADSNRSGSGW NDTTRSGNSG
860 870 880 890 900
WGNSTNTKAN PGTNWGETLK PGPQQNWASK PQDNNVSNWG GAASVKQTGT
910 920 930 940 950
GWIGGPVPVK QKDSSEATGW EEPSPPSIRR KMEIDDGTSA WGDPSNYNNK
960 970 980 990 1000
TVNMWDRNNP VIQSSTTTNT TTTTTTTTSN TTHRVETPPP HQAGTQLNRS
1010 1020 1030 1040 1050
PLLGPVSSGW GEMPNVHSKT ENSWGEPSSP STLVDNGTAA WGKPPSSGSG
1060 1070 1080 1090 1100
WGDHPAEPPV AFGRAGAPVA ASALCKPASK SMQEGWGSGG DEMNLSTSQW
1110 1120 1130 1140 1150
EDEEGDVWNN AASQESTSSC SSWGNAPKKG LQKGMKTSGK QDEAWIMSRL
1160 1170 1180 1190 1200
IKQLTDMGFP REPAEEALKS NNMNLDQAMS ALLEKKVDVD KRGLGVTDHN
1210 1220 1230 1240 1250
GMAAKPLGCR PPISKESSVD RPTFLDKLTL SFSNQDGGLV EEPTPSPFLP
1260 1270 1280 1290 1300
SPSLKLPLSH SALPSQALGG IASGLGMQNL NSSRQIPSGN LGMFGNSGAA
1310 1320 1330 1340 1350
QARTMQQPPQ PPVQPLNSSQ PSLRAQVPQF LSPQVQAQLL QFAAKNIGLN
1360 1370 1380 1390 1400
PALLTSPINP QHMTMLNQLY QLQLAYQRLQ IQQQMLQAQR NVSGSMRQQE
1410 1420 1430 1440 1450
QQVARTITNL QQQIQQHQRQ LAQALLVKQP PPPPPPPHLS LHPSAGKSAM
1460 1470 1480 1490 1500
DSFPSHPQTP GLPDLQTKEQ QSSPNTFAPY PLAGLNPNMN VNSMDMTGGL
1510 1520 1530 1540 1550
SVKDPSQSQS RLPQWTHPNS MDNLPSAASP LEQNPSKHGA IPGGLSIGPP
1560 1570 1580 1590 1600
GKSSIDDSYG RYDLIQNSES PASPPVAVPH SWSRAKSDSD KISNGSSINW
1610 1620 1630 1640 1650
PPEFHPGVPW KGLQNIDPEN DPDVTPGSVP TGPTINTTIQ DVNRYLLKSG
1660 1670 1680 1690 1700
GSSPPSSQNA TLPSSSAWPL SASGYSSSFS SIASAPSVAG KLSDIKSTWS
1710 1720 1730 1740 1750
SGPTSHTQAS LSHELWKVPR NSTAPTRPPP GLTNPKPSST WGASPLGWTS
1760 1770 1780 1790 1800
SYSSGSAWST DTSGRTSSWL VLRNLTPQID GSTLRTLCLQ HGPLITFHLN
1810 1820 1830 1840 1850
LTQGNAVVRY SSKEEAAKAQ KSLHMCVLGN TTILAEFAGE EEVNRFLAQG
1860 1870 1880 1890 1900
QALPPTSSWQ SSSASSQPRL SAAGSSHGLV RSDAGHWNAP CLGGKGSSEL
1910 1920 1930 1940
LWGGVPQYSS SLWGPPSADD SRVIGSPTPL TTLLPGDLLS GESL
Length:1,944
Mass (Da):202,721
Last modified:October 5, 2016 - v1
Checksum:i5E246DE29983C8F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015804 Genomic DNA No translation available.
AC021593 Genomic DNA No translation available.
KF511238 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000636222; ENSP00000489933; ENSG00000078687

Similar proteinsi

Entry informationi

Entry nameiA0A1B0GU24_HUMAN
AccessioniPrimary (citable) accession number: A0A1B0GU24
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2016
Last sequence update: October 5, 2016
Last modified: July 18, 2018
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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