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Protein

30S ribosomal protein S4

Gene

rpsD

Organism
Chlamydia sp. 2742-308
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.UniRule annotation
With S5 and S12 plays an important role in translational accuracy.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4UniRule annotation
Gene namesi
Name:rpsDUniRule annotation
ORF Names:Cs308_0366Imported
OrganismiChlamydia sp. 2742-308Imported
Taxonomic identifieri1806891 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000078162 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini93 – 156S4 RNA-bindingInterPro annotationAdd BLAST64

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili139 – 162Sequence analysisAdd BLAST24

Sequence similaritiesi

Belongs to the universal ribosomal protein uS4 family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
HAMAPiMF_01306_B Ribosomal_S4_B, 1 hit
InterProiView protein in InterPro
IPR022801 Ribosomal_S4/S9
IPR001912 Ribosomal_S4/S9_N
IPR005709 Ribosomal_S4_bac-type
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PANTHERiPTHR11831 PTHR11831, 1 hit
PTHR11831:SF4 PTHR11831:SF4, 1 hit
PfamiView protein in Pfam
PF00163 Ribosomal_S4, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM01390 Ribosomal_S4, 1 hit
SM00363 S4, 1 hit
TIGRFAMsiTIGR01017 rpsD_bact, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1A9HV15-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARYCGPKNR VARRFGANIF GRSRNPLLKK PHPPGQHGMQ RKKKSDYGLQ
60 70 80 90 100
LEEKQKLKAC YGMILEKQLV KAFKAISKKQ GSVTKMFLEK FECRLDNMVY
110 120 130 140 150
RMGFAKTIFA AQQLVSHGHI LVNGRRVDRR SFFLRPGMQI SLKEKSKKLQ
160 170 180 190 200
SVKEALENKD ESSLPSYVSL DKVNYKGELL LSPEQDQIEA QLPLPINVSV

VCEFLAHRT
Length:209
Mass (Da):23,952
Last modified:October 5, 2016 - v1
Checksum:iDAAD7769B9ABF2D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP014639 Genomic DNA Translation: ANH78537.1
RefSeqiWP_066481856.1, NZ_CP014639.1

Genome annotation databases

EnsemblBacteriaiANH78537; ANH78537; Cs308_0366
PATRICifig|1806891.3.peg.357

Similar proteinsi

Entry informationi

Entry nameiA0A1A9HV15_9CHLA
AccessioniPrimary (citable) accession number: A0A1A9HV15
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2016
Last sequence update: October 5, 2016
Last modified: May 23, 2018
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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