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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Onchocerca ochengi (Filarial nematode worm)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi62 – 137Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOnchocerca ochengi (Filarial nematode worm)Imported
Taxonomic identifieri42157 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaSpiruromorphaFilarioideaOnchocercidaeOnchocerca
Proteomesi
  • UP000077448 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini62 – 137Nuclear receptorInterPro annotationAdd BLAST76
Domaini198 – 416NR LBDInterPro annotationAdd BLAST219

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili416 – 436Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A182E3R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYVYLREKSV SKPVRKDFDQ FRIEGFYLVV FRILKLSLKT RFIMDTSTSQ
60 70 80 90 100
NDATSTAISD ATDFCVVCGD KAIGKHYGAV ACNGCKGFFR RSVWQNLQYT
110 120 130 140 150
CRFSKQCNID KDHRNACRYC RFQKCLADGM KPEAIQNERD RIGSTKRSRK
160 170 180 190 200
RSLPAHLQPT STSGDINSDS DDALPSARIE RRYSKSEATT AASRRLVEMI
210 220 230 240 250
MDIESRLQGN QNINNILGGE GHENNSRQRS ISLMIGWANL LHPIPELPFT
260 270 280 290 300
DKVLLLKHCS PAFSLLHTVQ RSLSSTHIVL PNDTVLTLTP FHYPDLVAVI
310 320 330 340 350
SRILDELLTP LRRINVEKAE MSALKALVLL HPDVTGLTIT SREKLREARD
360 370 380 390 400
GVLRALFTYL KQILSPDDIS VRLSNLLLII PSLYSVAQML AQNTQLGVIF
410 420 430 440 450
GLTDQMSSSS KQVTVMNDCT DEHQDVKKDL SNLSKECNNI FFAKTPTLLA
460 470 480
NLVANQAISA HDNLQTTATL TNPAALPVSS FYSIDFED
Length:488
Mass (Da):54,725
Last modified:September 7, 2016 - v1
Checksum:iF846AEE0CBF0DF79
GO

Genome annotation databases

WBParaSiteinOo.2.0.1.t02628-RA; nOo.2.0.1.t02628-RA; nOo.2.0.1.g02628

Similar proteinsi

Entry informationi

Entry nameiA0A182E3R9_ONCOC
AccessioniPrimary (citable) accession number: A0A182E3R9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 7, 2016
Last sequence update: September 7, 2016
Last modified: May 23, 2018
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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