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Protein
Submitted name:

Uncharacterized protein

Gene

AXX17_At3g05890

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Enzyme and pathway databases

ReactomeiR-ATH-977347 Serine biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:AXX17_At3g05890Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000078284 Componenti: Chromosome 3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei76 – 98HelicalSequence analysisAdd BLAST23
Transmembranei118 – 137HelicalSequence analysisAdd BLAST20
Transmembranei176 – 202HelicalSequence analysisAdd BLAST27
Transmembranei209 – 232HelicalSequence analysisAdd BLAST24
Transmembranei238 – 257HelicalSequence analysisAdd BLAST20
Transmembranei277 – 296HelicalSequence analysisAdd BLAST20
Transmembranei339 – 359HelicalSequence analysisAdd BLAST21
Transmembranei379 – 403HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

ExpressionAtlasiA0A178VDP7 baseline and differential

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

OMAiVCFGMAM

Family and domain databases

InterProiView protein in InterPro
IPR005016 TDE1/TMS
PANTHERiPTHR10383 PTHR10383, 1 hit
PfamiView protein in Pfam
PF03348 Serinc, 1 hit

Sequencei

Sequence statusi: Complete.

A0A178VDP7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MACCLASCCA SATCGLCSSV ASGISRKSAR IAYCGLFGAS LVVSWILRET
60 70 80 90 100
GAPLLEKLPW INTSDSYTKE WYQQQAVLRV SFGNFLFFAI YALIMIGVKD
110 120 130 140 150
QNDRRDSWHH GGWGLKMIVW FLLVVLMFFV PNVIVSLYGT LSKFGAGAFL
160 170 180 190 200
LVQVVLLLDA THNWNDSWVE KDEKKWYIAL LVISIVCYIA TYTFSGILFI
210 220 230 240 250
WFNPSGQDCG LNVFFIVMPM ILAFVFAIIA LHPAVNGSLL PASVISVYCA
260 270 280 290 300
YVCYTGLSSE PHDYVCNGLN KSKAVNASTL ILGMLTTVLS VLYSALRAGS
310 320 330 340 350
STTFLSPPSS PRSGVKDALL GDPEDGKKSG EAEARPVSYS YSFFHIIFAL
360 370 380 390 400
ASMYAAMLLS GWTDSSESAT LIDVGWTSVW VKICTGWVTA GLYIWTLIAP

LILPDREFY
Length:409
Mass (Da):44,877
Last modified:April 12, 2017 - v1
Checksum:iBC7623885E1BC6C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LUHQ01000003 Genomic DNA Translation: OAP03986.1
RefSeqiNP_187268.2, NM_111492.5
UniGeneiAt.47823

Genome annotation databases

EnsemblPlantsiAT3G06170.1; AT3G06170.1; AT3G06170
GeneIDi819791
GrameneiAT3G06170.1; AT3G06170.1; AT3G06170
KEGGiath:AT3G06170

Similar proteinsi

Entry informationi

Entry nameiA0A178VDP7_ARATH
AccessioniPrimary (citable) accession number: A0A178VDP7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: March 28, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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