UniProtKB - A0A178UPZ2 (A0A178UPZ2_ARATH)
Protein
Submitted name:
AL1
Gene
AXX17_At5g05110
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
GO - Molecular functioni
- histone binding Source: InterPro
- metal ion binding Source: UniProtKB-KW
GO - Biological processi
- regulation of transcription, DNA-templated Source: InterPro
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: AL1Imported |
Gene namesi | Ordered Locus Names:AXX17_At5g05110Imported ORF Names:AN1_LOCUS21371Imported, C24_LOCUS21268Imported |
Organismi | Arabidopsis thaliana (Mouse-ear cress)Imported |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 185 – 237 | PHD-typeInterPro annotationAdd BLAST | 53 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 142 – 182 | DisorderedSequence analysisAdd BLAST | 41 |
Sequence similaritiesi
Belongs to the Alfin family.ARBA annotation
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationARBA annotationPhylogenomic databases
OMAi | KFYSLCD |
OrthoDBi | 1370179at2759 |
PhylomeDBi | A0A178UPZ2 |
Family and domain databases
CDDi | cd15613, PHD_AL_plant, 1 hit |
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR021998, Alfin IPR044104, PHD_AL_plant IPR019786, Zinc_finger_PHD-type_CS IPR011011, Znf_FYVE_PHD IPR001965, Znf_PHD IPR019787, Znf_PHD-finger IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF12165, Alfin, 1 hit PF00628, PHD, 1 hit |
SMARTi | View protein in SMART SM00249, PHD, 1 hit |
SUPFAMi | SSF57903, SSF57903, 1 hit |
PROSITEi | View protein in PROSITE PS01359, ZF_PHD_1, 1 hit PS50016, ZF_PHD_2, 1 hit |
i Sequence
Sequence statusi: Complete.
A0A178UPZ2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY
60 70 80 90 100
GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
110 120 130 140 150
LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG
160 170 180 190 200
SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
210 220 230 240
WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CACSHJ010000096 Genomic DNA Translation: CAA0400861.1 LUHQ01000005 Genomic DNA Translation: OAO95062.1 CACRSJ010000110 Genomic DNA Translation: VYS65967.1 |
RefSeqi | NP_196180.1, NM_120643.2 NP_850775.1, NM_180444.3 |
Genome annotation databases
EnsemblPlantsi | AT5G05610.1; AT5G05610.1; AT5G05610 AT5G05610.2; AT5G05610.2; AT5G05610 |
GeneIDi | 830444 |
Gramenei | AT5G05610.1; AT5G05610.1; AT5G05610 AT5G05610.2; AT5G05610.2; AT5G05610 |
KEGGi | ath:AT5G05610 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CACSHJ010000096 Genomic DNA Translation: CAA0400861.1 LUHQ01000005 Genomic DNA Translation: OAO95062.1 CACRSJ010000110 Genomic DNA Translation: VYS65967.1 |
RefSeqi | NP_196180.1, NM_120643.2 NP_850775.1, NM_180444.3 |
3D structure databases
SMRi | A0A178UPZ2 |
ModBasei | Search... |
Genome annotation databases
EnsemblPlantsi | AT5G05610.1; AT5G05610.1; AT5G05610 AT5G05610.2; AT5G05610.2; AT5G05610 |
GeneIDi | 830444 |
Gramenei | AT5G05610.1; AT5G05610.1; AT5G05610 AT5G05610.2; AT5G05610.2; AT5G05610 |
KEGGi | ath:AT5G05610 |
Phylogenomic databases
OMAi | KFYSLCD |
OrthoDBi | 1370179at2759 |
PhylomeDBi | A0A178UPZ2 |
Gene expression databases
ExpressionAtlasi | A0A178UPZ2, baseline and differential |
Family and domain databases
CDDi | cd15613, PHD_AL_plant, 1 hit |
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR021998, Alfin IPR044104, PHD_AL_plant IPR019786, Zinc_finger_PHD-type_CS IPR011011, Znf_FYVE_PHD IPR001965, Znf_PHD IPR019787, Znf_PHD-finger IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF12165, Alfin, 1 hit PF00628, PHD, 1 hit |
SMARTi | View protein in SMART SM00249, PHD, 1 hit |
SUPFAMi | SSF57903, SSF57903, 1 hit |
PROSITEi | View protein in PROSITE PS01359, ZF_PHD_1, 1 hit PS50016, ZF_PHD_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A178UPZ2_ARATH | |
Accessioni | A0A178UPZ2Primary (citable) accession number: A0A178UPZ2 Secondary accession number(s): A0A5S9Y201 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | September 7, 2016 |
Last sequence update: | September 7, 2016 | |
Last modified: | February 10, 2021 | |
This is version 24 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |