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Protein

Phosphoglycerate kinase

Gene

pgk

Organism
Mycolicibacterium iranicum
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate.UniRule annotationSAAS annotation

Pathwayi: glycolysis

This protein is involved in step 2 of the subpathway that synthesizes pyruvate from D-glyceraldehyde 3-phosphate.UniRule annotationSAAS annotation
Proteins known to be involved in the 5 steps of the subpathway in this organism are:
  1. no protein annotated in this organism
  2. Phosphoglycerate kinase (pgk), Phosphoglycerate kinase (pgk)
  3. 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (gpmA), 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (gpmA)
  4. Enolase (eno), Enolase (eno)
  5. Pyruvate kinase (AWC12_17230), Pyruvate kinase (A4X20_22635)
This subpathway is part of the pathway glycolysis, which is itself part of Carbohydrate degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes pyruvate from D-glyceraldehyde 3-phosphate, the pathway glycolysis and in Carbohydrate degradation.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei39SubstrateUniRule annotation1
Binding sitei121SubstrateUniRule annotation1
Binding sitei161SubstrateUniRule annotation1
Binding sitei211ATPUniRule annotation1
Binding sitei299ATP; via carbonyl oxygenUniRule annotation1
Binding sitei330ATPUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi359 – 362ATPUniRule annotation4

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinaseUniRule annotationSAAS annotationImported, Transferase
Biological processGlycolysisUniRule annotationSAAS annotation
LigandATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

UniPathwayiUPA00109; UER00185

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoglycerate kinaseUniRule annotationSAAS annotation (EC:2.7.2.3UniRule annotationSAAS annotation)
Gene namesi
Name:pgkUniRule annotationImported
ORF Names:A4X20_10550Imported
OrganismiMycolicibacterium iranicumImported
Taxonomic identifieri912594 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycolicibacterium
Proteomesi
  • UP000078396 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Monomer.UniRule annotationSAAS annotation

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni24 – 26Substrate bindingUniRule annotation3
Regioni62 – 65Substrate bindingUniRule annotation4

Sequence similaritiesi

Belongs to the phosphoglycerate kinase family.UniRule annotationSAAS annotation

Family and domain databases

CDDicd00318 Phosphoglycerate_kinase, 1 hit
Gene3Di3.40.50.1260, 2 hits
HAMAPiMF_00145 Phosphoglyc_kinase, 1 hit
InterProiView protein in InterPro
IPR001576 Phosphoglycerate_kinase
IPR015911 Phosphoglycerate_kinase_CS
IPR015824 Phosphoglycerate_kinase_N
IPR036043 Phosphoglycerate_kinase_sf
PANTHERiPTHR11406 PTHR11406, 1 hit
PfamiView protein in Pfam
PF00162 PGK, 1 hit
PIRSFiPIRSF000724 Pgk, 1 hit
PRINTSiPR00477 PHGLYCKINASE
SUPFAMiSSF53748 SSF53748, 1 hit
PROSITEiView protein in PROSITE
PS00111 PGLYCERATE_KINASE, 1 hit

Sequencei

Sequence statusi: Complete.

A0A178LFG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIKSLDDLL SEGVSGRGVL VRSDLNVPLD DGRITDPGRI IASVPTLKEL
60 70 80 90 100
SDAGAKVVVT AHLGRPKGEP DPQLSLAPVA EALGDKLGRH VQLAGDVVGT
110 120 130 140 150
DALARAEGLT DGDILLLENI RFDSRETSKD DAERLALAKA LVELVGEDGA
160 170 180 190 200
FVSDGFGVVH RKQASVYDVA TLLPHYAGKL VDTEVKVLAQ LTESTERPYA
210 220 230 240 250
VVLGGSKVSD KLAVIENLAT KADSLIIGGG MCFTFLAAQG VSVGNSLLEE
260 270 280 290 300
SMIETCRKLL DDYGDVLHLP VDIVVAEKFA ADSPAKTVAA DKIPDGTMGL
310 320 330 340 350
DIGPESVKRF TTLLSNAKTI FWNGPMGVFE FPAFSAGTKG VAEAIISATG
360 370 380 390 400
KGAFSVVGGG DSAAAVRQLG LPEDGFSHIS TGGGASLEYL EGKELPGISV

LES
Length:403
Mass (Da):41,863
Last modified:September 7, 2016 - v1
Checksum:i5E24D51E9EA2A1A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LWCS01000076 Genomic DNA Translation: OAN28626.1
RefSeqiWP_064285039.1, NZ_LWCS01000076.1

Genome annotation databases

EnsemblBacteriaiOAN28626; OAN28626; A4X20_10550

Similar proteinsi

Entry informationi

Entry nameiA0A178LFG4_9MYCO
AccessioniPrimary (citable) accession number: A0A178LFG4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 7, 2016
Last sequence update: September 7, 2016
Last modified: July 18, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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