Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Neurogenic differentiation factor

Gene

NEUROD2

Organism
Alligator mississippiensis (American alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinUniRule annotation, DNA-bindingUniRule annotation
Biological processDifferentiationUniRule annotation, NeurogenesisUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Neurogenic differentiation factorUniRule annotation
Gene namesi
Name:NEUROD2Imported
ORF Names:Y1Q_0012045Imported
OrganismiAlligator mississippiensis (American alligator)Imported
Taxonomic identifieri8496 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000050525 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini103 – 155BHLHInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili93 – 129Sequence analysisAdd BLAST37

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

KOiK09078
PhylomeDBiA0A151P5K7

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032649 Neurod2
IPR022575 Neurogenic_DUF
IPR016637 TF_bHLH_NeuroD
PANTHERiPTHR19290:SF83 PTHR19290:SF83, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF12533 Neuro_bHLH, 1 hit
PIRSFiPIRSF015618 bHLH_NeuroD, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

A0A151P5K7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTRLFSEPS LIPEVQKFSS WADDCEDDER PEKEERKGKS CPLQEEQTEG
60 70 80 90 100
SLGENKEEGD IGGDEEEEEE EEEGLEEAEG DRPKKRGPKK RKMTKARLER
110 120 130 140 150
SKLRRQKANA RERNRMHDLN AALDNLRKVV PCYSKTQKLS KIETLRLAKN
160 170 180 190 200
YIWALSEILR SGKRPDLVSY VQTLCKGLSQ PTTNLVAGCL QLNSRNFLTE
210 220 230 240 250
QGQEAGRYHG PNSSFAMHPY TYQCSRLSGA QCQSSTMASS HALRTHAYCA
260 270 280 290 300
TYETLYGNAS PDYNSSEYDG PLSPPLCING NFSLKQDSSP DHEKNYHYSM
310 320 330 340 350
HYSALPSSRP SGHNLVFGSS GMRGGVHSEN ILPYDMHLHH ERGPMYEELN

AFFHN
Length:355
Mass (Da):40,231
Last modified:June 8, 2016 - v1
Checksum:i8EFCFD9F302FA065
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKHW03000817 Genomic DNA Translation: KYO44260.1
RefSeqiXP_006275036.1, XM_006274974.2

Genome annotation databases

GeneIDi102566952
KEGGiamj:102566952

Similar proteinsi

Entry informationi

Entry nameiA0A151P5K7_ALLMI
AccessioniPrimary (citable) accession number: A0A151P5K7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: February 28, 2018
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health