Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Nephrocystin-3

Gene

NPHP3

Organism
Alligator mississippiensis (American alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Names & Taxonomyi

Protein namesi
Submitted name:
Nephrocystin-3Imported
Gene namesi
Name:NPHP3Imported
ORF Names:Y1Q_0017624Imported
OrganismiAlligator mississippiensis (American alligator)Imported
Taxonomic identifieri8496 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000050525 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini929 – 1280TPR_REGIONInterPro annotationAdd BLAST352
Repeati929 – 962TPRPROSITE-ProRule annotationAdd BLAST34
Repeati971 – 1004TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1013 – 1046TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1079 – 1112TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1121 – 1154TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1163 – 1196TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1205 – 1238TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1247 – 1280TPRPROSITE-ProRule annotationAdd BLAST34

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili96 – 145Sequence analysisAdd BLAST50
Coiled coili163 – 190Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, TPR repeatPROSITE-ProRule annotation

Phylogenomic databases

KOiK19360

Family and domain databases

Gene3Di1.25.40.10, 3 hits
InterProiView protein in InterPro
IPR007111 NACHT_NTPase
IPR027417 P-loop_NTPase
IPR006597 Sel1-like
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF05729 NACHT, 1 hit
PF13176 TPR_7, 2 hits
SMARTiView protein in SMART
SM00671 SEL1, 3 hits
SM00028 TPR, 8 hits
SUPFAMiSSF48452 SSF48452, 2 hits
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 8 hits
PS50293 TPR_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A151P2Q1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTASSLVSP AGGAGEVIED TYGGGGGEAC EIPVEVKPKA RLLRSSLRRV
60 70 80 90 100
GASRPGGLIG ASFKSTASVQ ELECAAEYER LKKEYEIFRV SKSNEVASMV
110 120 130 140 150
KKEAKLDREN KRLRAELQAL QKTYQKILRE KESALEAKYQ AMERAATFEH
160 170 180 190 200
DRDKVKRQFK IFRETKENEI QDLLRAKREL EAKLQRLQAQ GIQVFDPEES
210 220 230 240 250
DSDDNCTEIT ATGAQSEYWT GGALGSEPSM GSMMQLQQSF RGPEFAHSSI
260 270 280 290 300
DVEGPFANIN RDDWDAAVAS LLQVTPLFSH SLWSNTVRCY IISTDETRPE
310 320 330 340 350
VDIFIRNYSP KLQRICETKG YFFQVVHFPS ENQSQFKDVR KWEIEKSFLV
360 370 380 390 400
ILLMKSTLPS CLLDDCEEAF LKNPEGKPRL IYRRIEEGTV GSDSVQQLIE
410 420 430 440 450
QVCYVNKAKI VDHMGEVDEG AYEIANCVEK IIKQDILGYE NTELEGKDLG
460 470 480 490 500
NKEESTAPEE DDFGDVLWDA HDEQEQMEAF QQASSSTCEL GFEKYYERLN
510 520 530 540 550
DLVAAPAPIP PLLVSGGPGS GKSLLLSKWI QLQQKHSPNT LILYHFVGRP
560 570 580 590 600
MSTSSESALI IKRLTLKLMQ HSWLVSPLTL DPSKLLEEFP RWLEKLSARH
610 620 630 640 650
QGSIIIIIDS VDQIQQAEKH MKWLIDPLPV NVRVIVSVNV ETCPQAWRLW
660 670 680 690 700
PTLHLDPLNS KDVKSLINAE CSSANIKLTK EQEKKLERHC RSATTCNALY
710 720 730 740 750
VTLLGKMIAC AGSEGNIDET LQQCFQCQDT VSLYRLVLRS VQESLPNDMD
760 770 780 790 800
KDLMREVLCL ITVSHNGVSE SEVMELYPEL SSALLASLVH SLHKMCLLTY
810 820 830 840 850
GCGLLKFRHL QAWEMVRLEY MEEGQNISSY RQKLIDYFAM QLSQDRVTWR
860 870 880 890 900
SADELPWLFQ LQGDKQKLHK CLLNLFVSQN LYKRGHFAEL LSYWQLVGKD
910 920 930 940 950
KSSMAAEYFN SLKEYEKSCE GEKSMLCLAD LYETLGRFLK DLGLLSQAVA
960 970 980 990 1000
PLQRSLEIRE TALDPDHPRV AQSLHQLAGV YMQWKKFGNA EPLYKQALEI
1010 1020 1030 1040 1050
SENAYGAEHP RVARELDALA TLYQKQNKYE QAEQLRKKSF KIRQKAARRK
1060 1070 1080 1090 1100
GSSCGFALLR QRALQLEELT LGKDTPDNAR TLNELGVLYY LQNNLETAEL
1110 1120 1130 1140 1150
FLKRSLEMRE RVLGPDHPDC AQSLNNLAAL YNEKKHYDKA EELYERALDI
1160 1170 1180 1190 1200
RRRALAPDHP SLAYTVKHLA VLYKKMGKLD KAVPLYELTV EIRQKSFGPK
1210 1220 1230 1240 1250
HPSVATALVN LAVLYCQMKK RTEALPLYER ALKIYEDSFG RMHPRVGETL
1260 1270 1280 1290 1300
KNLAVLSYEG GDFEKAAELY KRAMEIKEAE TSLIGGKTPS RHSSSGDAFS
1310
LKSALSPNVF LEHGQG
Length:1,316
Mass (Da):149,210
Last modified:June 8, 2016 - v1
Checksum:i68BAC2E07DBCFB07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKHW03001210 Genomic DNA Translation: KYO43346.1
RefSeqiXP_014458003.1, XM_014602517.2

Genome annotation databases

GeneIDi102562822
KEGGiamj:102562822

Similar proteinsi

Entry informationi

Entry nameiA0A151P2Q1_ALLMI
AccessioniPrimary (citable) accession number: A0A151P2Q1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: June 20, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health