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Protein
Submitted name:

Nestin

Gene

NES

Organism
Alligator mississippiensis (American alligator)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
NestinImported
Gene namesi
Name:NESImported
ORF Names:Y1Q_0004508Imported
OrganismiAlligator mississippiensis (American alligator)Imported
Taxonomic identifieri8496 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000050525 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 323IF rodInterPro annotationAdd BLAST308

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili20 – 54Sequence analysisAdd BLAST35
Coiled coili61 – 81Sequence analysisAdd BLAST21
Coiled coili89 – 162Sequence analysisAdd BLAST74
Coiled coili200 – 220Sequence analysisAdd BLAST21
Coiled coili228 – 255Sequence analysisAdd BLAST28
Coiled coili260 – 294Sequence analysisAdd BLAST35
Coiled coili530 – 550Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

KOiK07609

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR031211 Nestin
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF131 PTHR23239:SF131, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A151NY65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSMEGLLGA RALEKESLQM WDLNKRLEAY LARVKFLEEE NEVLRAEIQR
60 70 80 90 100
AKSSPAERSW RSRYEEELRA LRATLDDAFK EKCLAELARD NLYEEVEQVR
110 120 130 140 150
SRCERERAAR DEAKRQLGLS KKELEEERRA QIWLKERAAQ LEKEVEALME
160 170 180 190 200
IHEEDRAQLD QEVARFSCSL ESFRAPSAAF QPLEVEDYSK RLAEIWKGAV
210 220 230 240 250
ETYKSEVAQL ESTLGQAKES LWQAVEGNRQ NQLQLQQLEK DLAGLKARKE
260 270 280 290 300
MLEENLSQQW QEQRGEAEKF QLAIEALEQE KQALRVQIAQ VLEDRQQLMH
310 320 330 340 350
LKMSLSLEVA TYRTLLEAES TRLQLPAGEF KLANGLREAK LEMSSSKLQA
360 370 380 390 400
MSPEPRRLLS WDHRLSPMVF QKTENKMHLL RTPTESPRLQ TAVLPQSRRP
410 420 430 440 450
ITRELPKAIA GFQFSPRQSV DTAGPSNAAP GPVGASQGLA ATEIKTVARS
460 470 480 490 500
FSRESPELLN SPRSAMPEPL GQPPSGLEGD REAEPGAQKE AGEMGKEDEE
510 520 530 540 550
AVREEGRDAS EEPPGKPVPR DLLYPDQLVT EALEDALREV KQDANAAEGS
560 570 580 590 600
SPLCTDWAPL EEAHGLAAPP AAEELDGEMM CELEGLMDPS QPLETVSGTS
610 620 630 640 650
READGDLQPQ PEDSMGEPGM QKESGQLWTP SRGTEDYSSQ AEVQDSEAEI
660 670 680 690 700
CMAQAFSMQS LPAAPQELPL RGDEEEDWEQ GVQSPVQQDT EVPWEMRGPS
710 720 730 740 750
PRQDEEQPSA EPQEDASSWE QDESKQEETP PLQSPEERGE AEAICRGTEP
760 770 780 790 800
LGNDALVLTE PTREIWEVGA HGRSAQAGSS EEFDRGEEDL EVMSTEALHL
810 820 830 840 850
SEDEERREHW SQSREIEEYS FQAGTQESDF FQAEIQATQA FSMQSCPALP
860 870 880 890 900
EENLAEQLQT TEVEGKHFQK TEMVLEGEGK VEMVTEAQDF GISGDEVSFR
910 920 930 940 950
AEEAETPDEA REGGDEHKEK LEGEASGSEI LCMGHEGLRQ EEGSLEETGD
960 970 980 990 1000
LQEDTSGQDT GPGEEVLEMP QRQESWGREG DVEEDYCRSP LLEEGEEIAE
1010 1020 1030 1040 1050
GYSEDGEGAE VLAQAGHAMT SMGAADSREE QTQDSLGSEV QERREEEDAD
1060 1070 1080 1090 1100
IGHGAGQEPP TQDSKVEQVA GPSTELMGET QHSPERPSED IQSPPTLPLA
1110 1120 1130 1140 1150
DSPHQEILEE PEKTWEEPSE MQGKAATEGD HNEYEEPDNL DVASKMHPLG
1160 1170 1180 1190 1200
QGDFSESEDS LASQEDVDLK AEGTDEELDR STRIRLEETL PDSTPLHVYE
1210 1220 1230 1240 1250
GEMLAQSLSS QEPPAAEGMA DPAPSSLVSL EGAGQVETGT EPTGSRDGWS
1260 1270 1280 1290 1300
SEEHTAGTGP LESTEEEGYF MVSAAPHETP SWEEVEGSED FEEIQVEAAG
1310 1320 1330 1340 1350
ALGVDLSLGT TQPEMQENMG QCGESTDEPV EGLGADTAQA QTSKDKGDWG
1360 1370 1380 1390 1400
VHDEELSTAT VPEDQAPLGE PTAGSEGLAA ELDAGQDGEA GELPQEDSKP
1410 1420 1430 1440 1450
CPSDTAPEAE ESGVSPENVV QDGAQTPKAI SPGTGDAPKV SPLTTVADLG
1460 1470 1480 1490 1500
EIVLEGQALA SQTAADGSLP SKDVRALDIT LAPPDGPEAS SQEDNSGQHK
1510 1520 1530 1540 1550
EDAEKSQEVL VLSPDTAEML PVSVMKDSDI LEIVEQALEF NQELMLGAKL
1560 1570 1580 1590 1600
PELPDDAGQP APGTGEASEP APEARSDGSD SSSSTDELRA VHEALEDSSP
1610 1620 1630 1640 1650
GTKGLVTSGL VWAENHATTD LNGVHHEARL AELAEFTEEI LNGISDLQVP
1660 1670 1680 1690 1700
DGRNGCEEIA IPPGLHGQDP DTFPVYQSSL PRSDEGGHQD GDTPLEKAPM
1710 1720 1730 1740 1750
PLDPDSCKLA DILQRGKTLE AQSISVPSAF GDEILHLSPG QPLQLQPKDA

QGSWSSEDD
Length:1,759
Mass (Da):191,964
Last modified:June 8, 2016 - v1
Checksum:i10C3E745E0716B38
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKHW03001603 Genomic DNA Translation: KYO41816.1
RefSeqiXP_019340400.1, XM_019484855.1

Genome annotation databases

GeneIDi102573295
KEGGiamj:102573295

Similar proteinsi

Entry informationi

Entry nameiA0A151NY65_ALLMI
AccessioniPrimary (citable) accession number: A0A151NY65
Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: July 18, 2018
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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