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Protein
Submitted name:

Optineurin

Gene

OPTN

Organism
Alligator mississippiensis (American alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
OptineurinImported
Gene namesi
Name:OPTNImported
ORF Names:Y1Q_0023437Imported
OrganismiAlligator mississippiensis (American alligator)Imported
Taxonomic identifieri8496 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000050525 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini516 – 546CCHC NOA-typeInterPro annotationAdd BLAST31

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili40 – 60Sequence analysisAdd BLAST21
Coiled coili90 – 148Sequence analysisAdd BLAST59
Coiled coili160 – 180Sequence analysisAdd BLAST21
Coiled coili206 – 247Sequence analysisAdd BLAST42
Coiled coili268 – 309Sequence analysisAdd BLAST42
Coiled coili320 – 347Sequence analysisAdd BLAST28
Coiled coili392 – 433Sequence analysisAdd BLAST42

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

KOiK19946

Family and domain databases

InterProiView protein in InterPro
IPR032419 CC2-LZ_dom
IPR021063 NEMO_N
IPR034735 NEMO_ZF
IPR032939 Optineurin
PANTHERiPTHR31553:SF2 PTHR31553:SF2, 1 hit
PfamiView protein in Pfam
PF16516 CC2-LZ, 1 hit
PF11577 NEMO, 1 hit
PROSITEiView protein in PROSITE
PS51801 ZF_CCHC_NOA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A151NPP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSCPAENGK CPNSEMENGT HDMAPSTFSM YTPEEMVQQM KELITENNEL
60 70 80 90 100
KEAMKLHNQA MKDRYEELSV WREKQKEERE FFESKFKEAK NCLQAKCVEN
110 120 130 140 150
EELRKQLQNL KERKEGPEME LAQLKTQVTR LQAEKADLVA IISELQLKLN
160 170 180 190 200
ISGEDSFVEI RMMEGEVSRA LRENQDINRQ GTSDVAAFMD KSMDEVKNLE
210 220 230 240 250
SEELTVSQLL HCLRNETQQR ESLEKELQEH KERLLKLEKA ASDQLEIGTQ
260 270 280 290 300
TEWENEEDKS SETVGSEIET LNLQVSALFK ELQEAHSKLK EAELIQKKLQ
310 320 330 340 350
EKCQILERKS AAVSTDQDEK QQLLYTIKKL ELQVESMQSE IKLEQAKTQE
360 370 380 390 400
EKTKCAAVQE AYSKLLPEFT DALSTVEELK SKESERVEKV VVEELNKKLE
410 420 430 440 450
LAEKALATKQ LQLDEIKQTI AKQEEDLETM AVLRAQMELY CSDFHAERAA
460 470 480 490 500
REKIHEEKEQ LAVQLAYLLK DQSNLEDLGR NSLVEMQSRH GARTSLDREH
510 520 530 540
LPHLVRRGTG GQDWQQSNIP MHSCPKCGEI LPDIDTLQIH VMDCII
Length:546
Mass (Da):62,983
Last modified:June 8, 2016 - v1
Checksum:i9023D592CE8C1CFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKHW03002440 Genomic DNA Translation: KYO38744.1
RefSeqiXP_019343103.1, XM_019487558.1

Genome annotation databases

GeneIDi102562810
KEGGiamj:102562810

Similar proteinsi

Entry informationi

Entry nameiA0A151NPP5_ALLMI
AccessioniPrimary (citable) accession number: A0A151NPP5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: February 28, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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