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Protein
Submitted name:

Uncharacterized protein

Gene

Y1Q_0012601

Organism
Alligator mississippiensis (American alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:Y1Q_0012601Imported
OrganismiAlligator mississippiensis (American alligator)Imported
Taxonomic identifieri8496 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000050525 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei426 – 449HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_500758484430 – 526Sequence analysisAdd BLAST497

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini195 – 280Ig-likeInterPro annotationAdd BLAST86

Keywords - Domaini

Leucine-rich repeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.10, 2 hits
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR000372 LRRNT
IPR031635 NTRK_C2
IPR020455 Tyr_kin_neurotrophic_rcpt_2
IPR020777 Tyr_kinase_NGF_rcpt
PfamiView protein in Pfam
PF07679 I-set, 2 hits
PF13855 LRR_8, 1 hit
PF16920 TPKR_C2, 1 hit
PRINTSiPR01939 NTKRECEPTOR
PR01941 NTKRECEPTOR2
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00408 IGc2, 1 hit
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF48726 SSF48726, 2 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS51450 LRR, 1 hit

Sequencei

Sequence statusi: Complete.

A0A151M895-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPWRRRWQG PGLWGLCCLV LGSWPGLLAC PTSCRCSAWR IWCTEPAPGV
60 70 80 90 100
VSFPRLERSA ERDNISDIYI ANQRKLESIN DNEVGLYIGL RNLTVVDSGL
110 120 130 140 150
KFVSRQAFLK NINLQYINLS RNKLSSLSKK PFRHLSLSDL ILVDNPFKCS
160 170 180 190 200
CDIMWIKIFQ ETKFSNAETQ DFYCINDNNK RIALMEMQIP NCGLPLANLS
210 220 230 240 250
SYNLTVLEGN SITVYCDATG VPLPNVSWAF TNLVSNHESD TSKNPASLTI
260 270 280 290 300
KNVSSKDNGL RISCLAENIV GEDQASVELT VFFAPNITFI ESPTSDHHWC
310 320 330 340 350
IPFTVKGNPK PTLQWFYEGA ILNESEYICT KIHVINQSEY HGCLQLDNPT
360 370 380 390 400
HLNNGAYTLL AKNEYGEDEK RVDAHFMSMP GDGSGPILDP DLYDYETTPN
410 420 430 440 450
DIGDTTNNSN QITSTGFINT ENEDSITVYV VVGIAALVCT GLVIMLIILK
460 470 480 490 500
FGRHSKFGMK GPSSVISNDD DSASPLHHIS NGSNTPSSSE GGPDAVIIGM
510 520
TKIPVIENPQ YFGITNSQLK PDTCGN
Length:526
Mass (Da):58,141
Last modified:June 8, 2016 - v1
Checksum:i2763FE48B3559BEF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKHW03006358 Genomic DNA Translation: KYO20727.1
RefSeqiXP_006272133.1, XM_006272071.3

Genome annotation databases

GeneIDi102559730

Similar proteinsi

Entry informationi

Entry nameiA0A151M895_ALLMI
AccessioniPrimary (citable) accession number: A0A151M895
Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: February 28, 2018
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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