Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pullulanase, type I

Gene

pulA

Organism
Lactobacillus crispatus
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Pullulanase, type IImported
Submitted name:
Type I pullulanaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pulAImported
ORF Names:CYJ79_10295Imported, HMPREF3209_01542Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLactobacillus crispatusImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri47770 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000070507 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000235119 Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 45Sequence analysisAdd BLAST45
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501453045346 – 1259Sequence analysisAdd BLAST1214

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
A0A135Z466

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
A0A135Z466

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini540 – 943AamyInterPro annotationAdd BLAST404

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Family and domain databases

Conserved Domains Database

More...
CDDi
cd10315 CBM41_pullulanase, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013784 Carb-bd-like_fold
IPR005323 CBM41_pullulanase
IPR006047 Glyco_hydro_13_cat_dom
IPR004193 Glyco_hydro_13_N
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR011840 PulA_typeI
IPR024968 SlpA_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00128 Alpha-amylase, 2 hits
PF02922 CBM_48, 1 hit
PF03714 PUD, 1 hit
PF03217 SlpA, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00642 Aamy, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02104 pulA_typeI, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A135Z466-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MILWRNLFMN KKSGHNIKFK SIFVCTSAIM SLWLGANLTT TQVHAAEDNA
60 70 80 90 100
APKSSEVVGQ TNSSKDNAAT ATVQNQSNAK AKQRQQGVAP QNVPTVLAAK
110 120 130 140 150
TKDEGTNNSP AREEVKDQTK VVIHYNGDGE KWVPYIWGKK PNGNGNEYKW
160 170 180 190 200
AGKDDNGYYS VIDLDKNYDQ VGVLIKTKGS WAGKDGTGAD RSLNVSDNGK
210 220 230 240 250
AEVFYKAGSD DAQKVTPEYH SANINLHYYG DDQVNKVNVW TDKDQDNKQL
260 270 280 290 300
ISLTKQGNSQ DGSIKLDNTD FNKLFVAPVG SDEITREFTP LPGNKATDIY
310 320 330 340 350
LVKNDTEAYY SKSFALADQS LSSAYMTSPD SLTVEAGKAT TVDKIKGKLS
360 370 380 390 400
LRNNSIDHIE AVDANTDGKA KKFIIHTKAD IDILKDNQVG LGMNFKNVDI
410 420 430 440 450
GPYVRSKAFD DKYAYDGDDL GCTYDSKKTQ IKLWAPTAKE VELNLYDSVD
460 470 480 490 500
NSAKPTNVIA LTRGDRGVWT GIIKGDKKGW AYDFKLTFGN GKITQTDDPY
510 520 530 540 550
SKAVTVNGVR SVIEDYNNIK PTDFNRMPSF SKPTDAIVYE TSIRDFSSDP
560 570 580 590 600
NSGIKDKGKF LGMIESGKTP TGQVTGLDYL KALGITHVQI MPSYDFASID
610 620 630 640 650
ETKSLKNQYN WGYDPKNYDV PEGSYSSDPT NPTARIIEMK EMINGLHKAG
660 670 680 690 700
IRVIMDVVYN HVYNPQEQAF ELTVPGYYFR YDADNNTTSD SGCGNDIGSQ
710 720 730 740 750
RKMVRKYIVD SVVYWAKNYN LDGFRFDIMS LLDRETMNDV RAALDKIDPG
760 770 780 790 800
IITYGEGWEV GNQKYTREEG TTQYTADKVP NVGFFSDDMR NSVKGNDDGS
810 820 830 840 850
EPGLVIGNGN ERNFDKHAVL FTDSFLRGKW LHNDSWEPHN YATPSQMVNY
860 870 880 890 900
AACHDGKTLY DYIKAAMPNE SDENSARRVR LANSMIMLSQ GISFFHSGQE
910 920 930 940 950
ALRTKGGNSN SYNSPVNINE INWERVGANK ASVQYFQKLA KLRKQLPILH
960 970 980 990 1000
LNDFNKIYDE NVTKIISYGR ETKDKNIKGV FEYEYNVNGK KLLIVFNVNN
1010 1020 1030 1040 1050
DKVALNNVDL SHGKKLLDSD GNVKLSDKTM LAPLSTLVVD EDGTMVLPDV
1060 1070 1080 1090 1100
PKPDQPVSPT TPGDKPGKPT TPENPRIPDQ KPANPIVPQE TIITPEAPSE
1110 1120 1130 1140 1150
NSIIDNTKNI INGSEETTTV STQDNTTTEI LLTHNAYVYD SEANPIYQND
1160 1170 1180 1190 1200
NKLVLKAGDT IKPLDNGKKY SIKGKLFYKV AKNQFVKVAN TVSYYKLAHN
1210 1220 1230 1240 1250
SFVYNKHGKA VKKNGKRILL KKNKHISLHS DKVVKIKGKK FYQLKDGSFI

KARNVKRIG
Length:1,259
Mass (Da):140,235
Last modified:June 8, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6A817CAE064F43C9
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
LSQY01000095 Genomic DNA Translation: KXI16401.1
PKIW01000071 Genomic DNA Translation: PLT10495.1

NCBI Reference Sequences

More...
RefSeqi
WP_005719486.1, NZ_PKIX01000013.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
KXI16401; KXI16401; HMPREF3209_01542

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|47770.36.peg.1534

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LSQY01000095 Genomic DNA Translation: KXI16401.1
PKIW01000071 Genomic DNA Translation: PLT10495.1
RefSeqiWP_005719486.1, NZ_PKIX01000013.1

3D structure databases

ProteinModelPortaliA0A135Z466
SMRiA0A135Z466
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKXI16401; KXI16401; HMPREF3209_01542
PATRICifig|47770.36.peg.1534

Family and domain databases

CDDicd10315 CBM41_pullulanase, 1 hit
Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR013784 Carb-bd-like_fold
IPR005323 CBM41_pullulanase
IPR006047 Glyco_hydro_13_cat_dom
IPR004193 Glyco_hydro_13_N
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR011840 PulA_typeI
IPR024968 SlpA_dom
PfamiView protein in Pfam
PF00128 Alpha-amylase, 2 hits
PF02922 CBM_48, 1 hit
PF03714 PUD, 1 hit
PF03217 SlpA, 2 hits
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit
TIGRFAMsiTIGR02104 pulA_typeI, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A135Z466_9LACO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A135Z466
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 8, 2016
Last sequence update: June 8, 2016
Last modified: December 5, 2018
This is version 16 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again