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Protein
Submitted name:

GyrI-like small molecule binding domain protein

Gene
N/A
Organism
uncultured bacterium
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 46H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi73 – 96H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
GyrI-like small molecule binding domain proteinImported
Organismiuncultured bacteriumImported
Taxonomic identifieri77133 [NCBI]
Taxonomic lineageiBacteriaenvironmental samples

Structurei

3D structure databases

SMRiA0A127SA25
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 106HTH araC/xylS-typeInterPro annotationAdd BLAST99

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029442 GyrI-like
IPR009057 Homeobox-like_sf
IPR018060 HTH_AraC
IPR018062 HTH_AraC-typ_CS
IPR011256 Reg_factor_effector_dom_sf
IPR020449 Tscrpt_reg_HTH_AraC-type
PfamiView protein in Pfam
PF06445 GyrI-like, 1 hit
PF12833 HTH_18, 1 hit
PRINTSiPR00032 HTHARAC
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SM00342 HTH_ARAC, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
SSF55136 SSF55136, 1 hit
PROSITEiView protein in PROSITE
PS00041 HTH_ARAC_FAMILY_1, 1 hit
PS01124 HTH_ARAC_FAMILY_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A127SA25-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDQAGIIRDL LIWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI
60 70 80 90 100
GAYIRARRLS KSAVALRLTA RPILDIALQY RFDSQQTFTR AFKKQFAQTP
110 120 130 140 150
ALYRRSPEWS AFGIRPPLRL GEFTMPEHKF VTLEDTPLIG VTQSYSCSLE
160 170 180 190 200
QISDFRHEMR YQFWHDFLGN APTIPPVLYG LNETRPSQDK DDEQEVFYTT
210 220 230 240 250
ALAQDQADGY VLTGHPVMLQ GGEYVMFTYE GLGTGVQEFI LTVYGTCMPM
260 270 280
LNLTRRKGQD IERYYPAEDA KAGDRPINLR CELLIPIRR
Length:289
Mass (Da):33,145
Last modified:May 11, 2016 - v1
Checksum:i4436B1A04BE86A93
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KU543697 Genomic DNA Translation: AMP46797.1
KU544858 Genomic DNA Translation: AMP48802.1
KU545010 Genomic DNA Translation: AMP49153.1
KU545093 Genomic DNA Translation: AMP49362.1
KU545338 Genomic DNA Translation: AMP49953.1
KU545512 Genomic DNA Translation: AMP50307.1
KU545846 Genomic DNA Translation: AMP51113.1
KU546266 Genomic DNA Translation: AMP52027.1
KU546420 Genomic DNA Translation: AMP52432.1
KU546644 Genomic DNA Translation: AMP53016.1
KU546790 Genomic DNA Translation: AMP53388.1
KU546961 Genomic DNA Translation: AMP53844.1
KU547244 Genomic DNA Translation: AMP54617.1
KU547865 Genomic DNA Translation: AMP55927.1
KU547970 Genomic DNA Translation: AMP56122.1
KU548156 Genomic DNA Translation: AMP56411.1
KU548742 Genomic DNA Translation: AMP57516.1
KU548885 Genomic DNA Translation: AMP57786.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KU543697 Genomic DNA Translation: AMP46797.1
KU544858 Genomic DNA Translation: AMP48802.1
KU545010 Genomic DNA Translation: AMP49153.1
KU545093 Genomic DNA Translation: AMP49362.1
KU545338 Genomic DNA Translation: AMP49953.1
KU545512 Genomic DNA Translation: AMP50307.1
KU545846 Genomic DNA Translation: AMP51113.1
KU546266 Genomic DNA Translation: AMP52027.1
KU546420 Genomic DNA Translation: AMP52432.1
KU546644 Genomic DNA Translation: AMP53016.1
KU546790 Genomic DNA Translation: AMP53388.1
KU546961 Genomic DNA Translation: AMP53844.1
KU547244 Genomic DNA Translation: AMP54617.1
KU547865 Genomic DNA Translation: AMP55927.1
KU547970 Genomic DNA Translation: AMP56122.1
KU548156 Genomic DNA Translation: AMP56411.1
KU548742 Genomic DNA Translation: AMP57516.1
KU548885 Genomic DNA Translation: AMP57786.1

3D structure databases

SMRiA0A127SA25
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029442 GyrI-like
IPR009057 Homeobox-like_sf
IPR018060 HTH_AraC
IPR018062 HTH_AraC-typ_CS
IPR011256 Reg_factor_effector_dom_sf
IPR020449 Tscrpt_reg_HTH_AraC-type
PfamiView protein in Pfam
PF06445 GyrI-like, 1 hit
PF12833 HTH_18, 1 hit
PRINTSiPR00032 HTHARAC
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SM00342 HTH_ARAC, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
SSF55136 SSF55136, 1 hit
PROSITEiView protein in PROSITE
PS00041 HTH_ARAC_FAMILY_1, 1 hit
PS01124 HTH_ARAC_FAMILY_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A127SA25_9BACT
AccessioniPrimary (citable) accession number: A0A127SA25
Entry historyiIntegrated into UniProtKB/TrEMBL: May 11, 2016
Last sequence update: May 11, 2016
Last modified: September 12, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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