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Entry version 12 (07 Oct 2020)
Sequence version 1 (13 Apr 2016)
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Protein
Submitted name:

Uncharacterized protein

Gene

ABW22_14485

Organism
Thiobacillus denitrificans
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:ABW22_14485Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiThiobacillus denitrificansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri36861 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesThiobacillaceaeThiobacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000064243 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei2368 – 2387HelicalSequence analysisAdd BLAST20

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini37 – 128LPD22InterPro annotationAdd BLAST92
Domaini812 – 1081LPD37InterPro annotationAdd BLAST270

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili732 – 752Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040738, LPD22
IPR041196, LPD37

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18834, LPD22, 1 hit
PF18853, LPD37, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A106BIY4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDLDELMDRS TQPVAAPDTV DDAMDAYSGA QTGAVRAGAT LALDSNPDEI
60 70 80 90 100
ARQKRIAQSL GVPLAAVEAD PEFATREQRV RSIEQATANS PALRQKFSDA
110 120 130 140 150
DFAKLAADNV DNLSGIEQLL RSAKRGFTAG LRGMDAAAVD DSARILTAID
160 170 180 190 200
TIERGGALSP NDPLASMFAG SGRSPDNLAQ MRAKHQGRVT ENVGEYGKRT
210 220 230 240 250
QALTKLQPTG ATADFYQAKG WGDSLSALLS DPFEISANVA TESLGLMAPA
260 270 280 290 300
LPMIAGGGLA GGARGLAGMA GATSTNAEYS TAIAEALQAS GVDLNNLEAV
310 320 330 340 350
QAAVATPEFA ETRRQATIKA ATIGAFDAAT AGMAGVRLRP SMAGNLAAQT
360 370 380 390 400
GVQATGGAAG EVAGSVASGQ EVNASSVLAE AIGEMPSAMI DVAMMAGKRT
410 420 430 440 450
LEGQRKADQA EQQGAFIKNL NKLAAADKLL ARDPETFQSF IAAVAEDGPV
460 470 480 490 500
QNVFIDGRTL MQSGMAPRLA ELSPAVLEQL DRAILTGGVI AIPVDEYAAR
510 520 530 540 550
IAPTEFAPQL LDHLKTDVEG FSRAEAADFM ANQGAELKAE FERVIGTQSD
560 570 580 590 600
ADTFRASHDV VKQDIIGQLN TAARFTPQVN DAYATLVAAR TAVRAAQMGM
610 620 630 640 650
TPEAFHQKYG MNARGAEVAG DKFDQAGVSF KEGSRGSRSG QTDMTLTADA
660 670 680 690 700
GGESVGRIDY SVYQGRPSVQ MIDVPEGKRR KGYATEMVKQ LQRQFPGVEI
710 720 730 740 750
DFGGLTEEGA ALYKALAKTT EPSEYAPAFD ELAAAIAERT ALEEKNAQLE
760 770 780 790 800
GTAERGAWIA QVGDRWNELH DIISDLEGEI FNKSPTKNLI NTFDPADPSI
810 820 830 840 850
LNQSANRSLY EKAWKMLAGN EAIFQNPMPD SFDMEGAARE IDPGMSAVAD
860 870 880 890 900
KPDLDEQKTG ITKKWYVTMP DGTHAYVMEN KQGEVWLDAS RLEEGASGGA
910 920 930 940 950
KLYLLVGSYA EGNGKVFIGD PAGLSDVALI RRTENMLSLA LRFGKTSFMR
960 970 980 990 1000
PHEYQMNPDA KQGTVLAGVV KPLEWVEGND ANNIEELIRT SYANTVKLVA
1010 1020 1030 1040 1050
EVKDVTFNFD KQRFEQDGVE FTKDGFKRLV DGLPGALRKR GLSKIVTTRN
1060 1070 1080 1090 1100
PGGKGGAAED FAPIGIATLK RAAVTNTLAR ETRAGRGGDL LAEIGRFVSG
1110 1120 1130 1140 1150
ELTGLAGTLY QPGGGNTAPR GSFSPATNTV TLLQNADLST FLHESAHYFF
1160 1170 1180 1190 1200
ESDIQLASEL AGKAEPTPGE QQIVDDVSRL LTWHGINGDV TEQLRTWHTM
1210 1220 1230 1240 1250
DFEEQRSHHE RTAESFEAYL FSGQAPSLEL QPMFQRFRAW MVNVYKSIKD
1260 1270 1280 1290 1300
FLAKNPEAGK LNNEVRSVFD RMIATQEQIQ LAEQARSLTA LFASPETSGM
1310 1320 1330 1340 1350
TADAFAAYQA LGTDATNTAI EQLQAKGLRD MQWLTNARGR EIKKLQKESK
1360 1370 1380 1390 1400
AARAEVTMEA RGEVMRQPVY RAWDFLTRKL SDNDKLPPLE RKSDPDVLDP
1410 1420 1430 1440 1450
TLDSLFVAIA KLGGIRKDQV LSEWGADPKD IPQSGLFGKP VWRVTEGLPI
1460 1470 1480 1490 1500
DSMASALAEH GYLPLNEHGQ YELNDLGDRF LAELSGDTQY SHAYQPQDLL
1510 1520 1530 1540 1550
PGEQIATPDG LMAGRIEFAG LAAIGIPEEI AAHLKTLKMT ATDGLHPDLV
1560 1570 1580 1590 1600
AVLFEFSSGD ELVRTLAAAP TPKDAINALA EQMMLERFGE LSSPDAIERA
1610 1620 1630 1640 1650
ADQAIHNDVR ARMLTTEVNA LAQATGKPKI LASAAKAFAA DMIARLKVRD
1660 1670 1680 1690 1700
VRPGQYANAE ARAAKAAAKA KGDIATAAAE KRNQVIQHYA TSAAYDAQDE
1710 1720 1730 1740 1750
VKATLRAWSK LVARKDSTKS VDIDLLNAVR AILGEYGIAP KRAERASEYL
1760 1770 1780 1790 1800
KSVQAYDPEM YAVIQASVER AEANAKPVKE LTLDQFRGLR DEIDSIMHLA
1810 1820 1830 1840 1850
KRSRQMEIDG DLLEIADIQD ALVERMTDYG IPETIPGEGQ AVTPAEQRMN
1860 1870 1880 1890 1900
KFKSLLAFAR RVESWVGQMD GTQQMGPFRR FVWSRISDAA VAYRVDKAAY
1910 1920 1930 1940 1950
MKQFRALVES IAPTLKPALI HSPELGYTFG KDSGGSAINE ILHAVLHTGN
1960 1970 1980 1990 2000
ESNKRKMLLG RGWAVEVAPG QLDTTRWNAF IARLVAEGKL TPAHYDFAQG
2010 2020 2030 2040 2050
AWDLLESMKP LAQKTHRDVF GRYFNEVTAN PFTDPFGVTR AGGYVPAMVD
2060 2070 2080 2090 2100
SRIVKDAELR KLADEDNAAM SYAFPTTPKG FTQARTEYNK PLMLDLRTLG
2110 2120 2130 2140 2150
QHVDKVLLFS HMEMPVREVQ RVLSKRVGET LNRIDQTAIS GMLLPWLNRS
2160 2170 2180 2190 2200
AKQQVETPIA GSAGTMRFFS VLRSHAGMAA MFGNLANTVQ QLTGFSLAAI
2210 2220 2230 2240 2250
KVKPSLLLAA TVDFTKAPRE FAQAVSETSA YMNTRMANEV YAMTDAINDI
2260 2270 2280 2290 2300
LLNPSLLEKG QAWTMRHAYF LQSAFDNSMS PIIWTAAYNQ AKQGGETHAD
2310 2320 2330 2340 2350
AVRLADGTVR ETQGAMQAED IARFEGGNAF VRMFTQFAGY FNMNANLLGT
2360 2370 2380 2390 2400
GYAQLMHNGG LRKNAGRGVF LFVFGFMIPA VVGELIIQLF RGGPGDDDDD
2410 2420 2430 2440 2450
GEYLDDWIAA VFGWAPLRYA TAMVPIAGQV VNAAVNSWNS KPYDDRLASS
2460 2470 2480 2490 2500
PAISMLESAA RAPVSVYKAI DGDGSAQKAV RDVATLMSMT LGLPANLAAR
2510 2520 2530
PIGYGVGVMD DATDPTSGFD FARGILTGQV SPDSKQ
Length:2,536
Mass (Da):273,908
Last modified:April 13, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCA6E0E5F6B6D6D8E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
LDUG01000048 Genomic DNA Translation: KVW93336.1

NCBI Reference Sequences

More...
RefSeqi
WP_059758262.1, NZ_LDUG01000048.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
KVW93336; KVW93336; ABW22_14485

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|36861.3.peg.2719

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LDUG01000048 Genomic DNA Translation: KVW93336.1
RefSeqiWP_059758262.1, NZ_LDUG01000048.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiKVW93336; KVW93336; ABW22_14485
PATRICifig|36861.3.peg.2719

Family and domain databases

InterProiView protein in InterPro
IPR040738, LPD22
IPR041196, LPD37
PfamiView protein in Pfam
PF18834, LPD22, 1 hit
PF18853, LPD37, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A106BIY4_THIDE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A106BIY4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 13, 2016
Last sequence update: April 13, 2016
Last modified: October 7, 2020
This is version 12 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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