Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA ligase

Gene

lig

Organism
Mycobacterium pseudoshottsii JCM 15466
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Name:ligImported
ORF Names:MPS_4755Imported, MPSD_42190Imported
OrganismiMycobacterium pseudoshottsii JCM 15466Imported
Taxonomic identifieri1136880 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000068147 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini282 – 406DNA_LIGASE_A3InterPro annotationAdd BLAST125

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A100IE44-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGGTSSRLAK VARIAELLRA AAPDPELVAI VVAWLSGELR QRQIGVGWAT
60 70 80 90 100
LRSLPAAAGS PALTVTGTDA AFSEIGAVSG KGSAARRREL ITRLFAASTE
110 120 130 140 150
TEQAFLVRLL SGELRQGALA GIMVDAVARA AEVPATAVQR AAMLGGDLPT
160 170 180 190 200
VAAACLAAGP SGAAGALDSF TLRVGRPIGP MLAQSAGSIT DALERHCGAT
210 220 230 240 250
IFEAKLDGAR VQIHRTGDEV TVYTRSLDDV TARLPEVVQA TLALPVSDLV
260 270 280 290 300
ADGEAIALQP DGRPHRFQVT ASRFGRSVNV AAAQAKQPLS VFFFDILHRD
310 320 330 340 350
GRDLLDAPTT DRLAALDAVV PARHRVDRLT TADAAAATDF LRATLAAGHE
360 370 380 390 400
GVMAKSPTAP YLAGRRGAGW LKVKPVHTLD LVVLAVEWGS GRRRGKLSNI
410 420 430 440 450
HLGARDAATG EFVMLGKTFK GMTDAMLDWQ TARFTELAVG GTDGYVVALR
460 470 480 490 500
PEQVVEVAFD GVQASSRYPG GLALRFARVV RYRDDKGPAD ADTIDTVRAL

Y
Length:501
Mass (Da):52,604
Last modified:April 13, 2016 - v1
Checksum:i82CC7EE4FCFE9A1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP018410 Genomic DNA Translation: BBA89587.1
BCND01000100 Genomic DNA Translation: GAQ39585.1

Genome annotation databases

EnsemblBacteriaiGAQ39585; GAQ39585; MPS_4755

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP018410 Genomic DNA Translation: BBA89587.1
BCND01000100 Genomic DNA Translation: GAQ39585.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiGAQ39585; GAQ39585; MPS_4755

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A100IE44_9MYCO
AccessioniPrimary (citable) accession number: A0A100IE44
Entry historyiIntegrated into UniProtKB/TrEMBL: April 13, 2016
Last sequence update: April 13, 2016
Last modified: November 7, 2018
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again