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Protein

ATP-dependent RNA helicase DeaD

Gene

deaD

Organism
Haemophilus influenzae
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.UniRule annotation

Catalytic activityi

ATP + H2O = ADP + phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseUniRule annotation, Hydrolase, RNA-bindingUniRule annotation
Biological processStress responseUniRule annotation
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ATP-dependent RNA helicase DeaDUniRule annotation (EC:3.6.4.13UniRule annotation)
Alternative name(s):
Cold-shock DEAD box protein AUniRule annotation
Gene namesi
Name:deaDUniRule annotationImported
ORF Names:ERS515279_01266Imported
OrganismiHaemophilus influenzaeImported
Taxonomic identifieri727 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000070891 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 33Q_MOTIFInterPro annotationAdd BLAST29
Domaini36 – 207Helicase ATP-bindingInterPro annotationAdd BLAST172
Domaini231 – 378Helicase C-terminalInterPro annotationAdd BLAST148

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi5 – 33Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family. DeaD subfamily.UniRule annotation

Family and domain databases

CDDicd00079 HELICc, 1 hit
cd12499 RRM_EcCsdA_like, 1 hit
Gene3Di3.30.70.330, 1 hit
HAMAPiMF_00964 DEAD_helicase_DeaD, 1 hit
InterProiView protein in InterPro
IPR034415 CsdA_RRM
IPR005580 DbpA/CsdA_RNA-bd_dom
IPR011545 DEAD/DEAH_box_helicase_dom
IPR028618 DEAD_helicase_DeaD
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR027417 P-loop_NTPase
IPR000629 RNA-helicase_DEAD-box_CS
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF03880 DbpA, 1 hit
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00039 DEAD_ATP_HELICASE, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0Y7L785-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDKITFNDL GLPEFILKAV SDLGFETPSP IQQACIPHLL SGNDVLGMAQ
60 70 80 90 100
TGSGKTAAFA LPLLAQIDPS EKHPQMLVMA PTRELAIQVA DACEQFVKYA
110 120 130 140 150
HGSRIVTLYG GQRYDIQLRA LKQGAQVVVG TPGRILDHIR RGTLNLSELR
160 170 180 190 200
FIVLDEADEM LRMGFIDDVE TVMAELPENH QTALFSATMP EPIRRITKRF
210 220 230 240 250
MNDPKEVKIK VNNENAPDIE QSCWYVHGVR KNEALLRFLE VEDFDAAIIF
260 270 280 290 300
ARTKTGTLDI TELLEKNGFR SAALNGDMTQ QLREQTLDRL RNGSLDIVVA
310 320 330 340 350
TDVAARGIDI ERISLVVNYD IPLDAESYVH RIGRTGRAGR SGRALLFVEP
360 370 380 390 400
RERRLLRNIE HLMKKGINEV ELPNHLVLQE CRRKKFVAKI TKQLEHHDLE
410 420 430 440 450
QYRSLLEDLF TADQDQEDIA AAMLMLLQGK QKLILPPDPP MEKRRRERNE
460 470 480 490 500
CGDRRENPRS AERRGERKGY GNPRPMDLYR IEVGRADGVE VRHIVGAIAN
510 520 530 540 550
EGDINSRYIG HIKLYDDYTT VELPQGMPKE LLQQFGKTRV LNKQMQMSFL
560 570 580 590 600
GAVKSDNSRG GDDFNGKRKG RGGDFRGERG RNERNGDNRG NRKFNEKSNR
610
TFSDKPRRDR RSSF
Length:614
Mass (Da):69,747
Last modified:July 6, 2016 - v1
Checksum:i888037ED54DB3A50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FFIN01000003 Genomic DNA Translation: CWX27126.1
RefSeqiWP_021034401.1, NZ_NIUV01000003.1

Genome annotation databases

EnsemblBacteriaiCWX27126; CWX27126; ERS515279_01266
PATRICifig|727.569.peg.1394

Similar proteinsi

Entry informationi

Entry nameiA0A0Y7L785_HAEIF
AccessioniPrimary (citable) accession number: A0A0Y7L785
Entry historyiIntegrated into UniProtKB/TrEMBL: July 6, 2016
Last sequence update: July 6, 2016
Last modified: March 28, 2018
This is version 13 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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