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UniProtKB - A0A0V0JC59 (A0A0V0JC59_SCHSO)

Entry version 15 (22 Apr 2020)
Sequence version 1 (16 Mar 2016)
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Protein
Submitted name:

Uncharacterized protein

Gene

TR120419

Organism
Schistocephalus solidus (Tapeworm)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:TR120419Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSchistocephalus solidus (Tapeworm)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri70667 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Platyhelminthes › Cestoda › Eucestoda › Diphyllobothriidea › Diphyllobothriidae › Schistocephalus

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini20 – 93TPR_REGIONInterPro annotationAdd BLAST74
Domaini157 – 190TPR_REGIONInterPro annotationAdd BLAST34
Domaini331 – 364TPR_REGIONInterPro annotationAdd BLAST34
Domaini615 – 720ANK_REP_REGIONInterPro annotationAdd BLAST106
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati615 – 648ANKPROSITE-ProRule annotationAdd BLAST34
Repeati649 – 677ANKPROSITE-ProRule annotationAdd BLAST29

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni525 – 568DisorderedSequence analysisAdd BLAST44
Regioni770 – 851DisorderedSequence analysisAdd BLAST82
Regioni869 – 953DisorderedSequence analysisAdd BLAST85

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi528 – 552PolarSequence analysisAdd BLAST25
Compositional biasi775 – 790PolarSequence analysisAdd BLAST16
Compositional biasi799 – 813PolarSequence analysisAdd BLAST15
Compositional biasi835 – 851PolarSequence analysisAdd BLAST17
Compositional biasi878 – 903PolyampholyteSequence analysisAdd BLAST26
Compositional biasi931 – 951PolarSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.25.40.10, 2 hits
1.25.40.20, 1 hit
3.80.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR002110, Ankyrin_rpt
IPR020683, Ankyrin_rpt-contain_dom
IPR036770, Ankyrin_rpt-contain_sf
IPR032675, LRR_dom_sf
IPR013026, TPR-contain_dom
IPR011990, TPR-like_helical_dom_sf
IPR019734, TPR_repeat

Pfam protein domain database

More...Pfami		View protein in Pfam
PF12796, Ank_2, 1 hit
PF13181, TPR_8, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00248, ANK, 4 hits
SM00028, TPR, 4 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48403, SSF48403, 1 hit
SSF48452, SSF48452, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50297, ANK_REP_REGION, 1 hit
PS50088, ANK_REPEAT, 2 hits
PS50293, TPR_REGION, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0V0JC59-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKLQRLLSQR DACHSSTERC ALTLEIALCY SEQGDFSAAV EEYKTLVVLL 
        60         70         80         90        100
EAGTDRLKTA LCYRSLSECF LELSNFNEAI RYASMYLKAT REIHNLLEQQ 
       110        120        130        140        150
RAFVTIGRCF LCRSDNLKNG ELARKSLMAA QQALINSIKC ISSLKELSAT 
       160        170        180        190        200
EAAEMKGVSL LNLGQVLRSL GQTESARERF EQCINLSRKY SLLKILFRSV 
       210        220        230        240        250
YQHAELSLLS WPDFRGQILR PSELLTVTEK GYLDNAVFLC SKTLRSYPAR 
       260        270        280        290        300
SCLDKETKML RQNLEELLGQ LYLAVGDCKR SAKVYKRLAL AYPQTSQTYR 
       310        320        330        340        350
SACRKALKMH SLLTKIQQFI STAAEDLLQV SRLYESLGDI YSSLELHSSA 
       360        370        380        390        400
VRHYQQMVNW ADSSFENQRK SVTSPEQLPI LSETVKHLDA ALVSAAEASR 
       410        420        430        440        450
SLGSYVMCAE FYRREIDLIL RSPSFSTSAS LSASELWQSW LSLGRALLLA 
       460        470        480        490        500
PKNTPMSLAS TFVPTPLPSS RTAEEALCAA LAAAKCTDSQ EAIRECLEEL 
       510        520        530        540        550
VEYHKSCGNT TAMQKLSVEL RALPEPDDLH SQQSSQARQR RGGTPASQAV 
       560        570        580        590        600
QEGEENDEND SIGLPSSPSE EVIDILSSDS DIEKLIDLSG VPSDILDSPG 
       610        620        630        640        650
HRRRGKALCL KTNLKGESPL HVATINGNLE NVVKLIEVLA HPLNVRDGAG 
       660        670        680        690        700
WLPIHEAAFH DRTDIANYLL DRGALIDDLG CPEDSSPPIF EALHNGSLRT 
       710        720        730        740        750
AILLVNRGAN LWHVNKAGET LSDLINNWKP KKRGSVSVQQ QSVLLMNLLD 
       760        770        780        790        800
AIKKKLGDTY DKWCSYRPSR RASAPRRHNT NYSLSKPPTV GPSSKAGPAR 
       810        820        830        840        850
RSFISSESSD ADEEAGLSVT VRRGKKKAPK SKKAQQGGRP STSRVDLDSP 
       860        870        880        890        900
PQLTEAVQDY RTAMQVVGSS AARFPSQPVD KKQRRKRPSA VPADDDSWLE 
       910        920        930        940        950
DDMSTRRAPG QPQRFKIPRD ASLETEDEYS SRAVGVSQRS PRETWTVGSP 
       960        970        980        990       1000
GHRQEQERFE TAVLFDPREI LSSTHMELPA LTQLTSSPVK RAVKPIEVPP 
      1010       1020       1030       1040       1050
SVPANIPALD AKWCTIKITF PDISLLLPVD TQSRTVAWVA EEALRRRDLL 
      1060       1070       1080       1090       1100
LHDVPGSTAT STPAAPLRHA TARLRTCDGA LLLPSDLLFS VLPASALSTG 
      1110       1120       1130       1140       1150
ATTELLAEVL EPVTSATSTK RSAMGSSTQH GGALQSYSRP PGMETLLPPV 
      1160       1170       1180       1190       1200
RAAVPHAPSV SQELANFSPK VRKALQEALL TGVLNLSRFA LGAASLTTAL 
      1210       1220       1230       1240       1250
ASYARISQHP TVELLLDGNL LSPKDLQPSC LSEEAPFAVV FRDLVCRSPG 
      1260       1270       1280       1290       1300
LRTLSLAENF ITADSLLSLL SFAENTENSS QPIVCAPLGQ LSRLNLSYNP 
      1310       1320       1330       1340       1350
LFAHTQSSPS TTALNSTISP NWLNDFTESE SPNQPPSLLS QLLRLCPNLS 
      1360       1370       1380       1390       1400
FFGLAGCSLT PDLCLEGGVL ATNLDAPVLC RQNLHATAST FSHLFELDLS 
      1410       1420       1430       1440       1450
WNPLVGEFSS AEFLINLLGI TSKLPQPLFS TLRCLRLRGC LQVADKQGGS 
      1460       1470       1480       1490       1500
PCLFIPNEVT GSWLSCDSEC VYSTQKAPVV SGDCLLSCLA KLLDTGKFHI 
      1510       1520       1530       1540       1550
QTLDVGHCNL TPSCLLSLQR LLAAPSTSLT SLVCDGNSAL RSVSALEGST 
      1560       1570       1580       1590       1600
WSRILATSSQ ASSALVNLCI DLPLLKTEED LVEAVHAVSL KLSASSSPTP 
      1610       1620       1630       1640       1650
LQEFCLKATP PEVFTGRIGK TTIVTCLSAT SYPVGSPSSS QFPVLAGNTL 
      1660       1670       1680 
TARFLRSVAQ SFRARFGKLA SVSADNLFVT FTIR
Length:1,684
Mass (Da):183,615
Last modified:March 16, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1CF21E843BE8B01E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
GEEE01000549 Transcribed RNA Translation: JAP62676.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEEE01000549 Transcribed RNA Translation: JAP62676.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Family and domain databases

Gene3Di1.25.40.10, 2 hits
1.25.40.20, 1 hit
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR002110, Ankyrin_rpt
IPR020683, Ankyrin_rpt-contain_dom
IPR036770, Ankyrin_rpt-contain_sf
IPR032675, LRR_dom_sf
IPR013026, TPR-contain_dom
IPR011990, TPR-like_helical_dom_sf
IPR019734, TPR_repeat
PfamiView protein in Pfam
PF12796, Ank_2, 1 hit
PF13181, TPR_8, 1 hit
SMARTiView protein in SMART
SM00248, ANK, 4 hits
SM00028, TPR, 4 hits
SUPFAMiSSF48403, SSF48403, 1 hit
SSF48452, SSF48452, 1 hit
PROSITEiView protein in PROSITE
PS50297, ANK_REP_REGION, 1 hit
PS50088, ANK_REPEAT, 2 hits
PS50293, TPR_REGION, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0V0JC59_SCHSO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0V0JC59
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 16, 2016
Last sequence update: March 16, 2016
Last modified: April 22, 2020
This is version 15 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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