Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative ovule protein

Gene
N/A
Organism
Solanum chacoense (Chaco potato)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ovule proteinImported
OrganismiSolanum chacoense (Chaco potato)Imported
Taxonomic identifieri4108 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 224Alphavirus-like MTInterPro annotationAdd BLAST166
Domaini695 – 997(+)RNA virus helicase C-terminalInterPro annotationAdd BLAST303
Domaini1236 – 1343RdRp catalyticInterPro annotationAdd BLAST108

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1016 – 1036Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR027351 (+)RNA_virus_helicase_core_dom
IPR002588 Alphavirus-like_MT_dom
IPR027417 P-loop_NTPase
IPR007094 RNA-dir_pol_PSvirus
IPR001788 Tymovirus_RNA-dep_RNA_pol
PfamiView protein in Pfam
PF00978 RdRP_2, 1 hit
PF01443 Viral_helicase1, 1 hit
PF01660 Vmethyltransf, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51743 ALPHAVIRUS_MT, 1 hit
PS51657 PSRV_HELICASE, 1 hit
PS50507 RDRP_SSRNA_POS, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0V0J0I8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKVREVYQS FTDSTTKTLI QDEAYRNIRP IMEKHKLANP YAQTVEAAND
60 70 80 90 100
LEGFGIATNP YSIELHTHAA AKTIENKLLE VLGSILPQEP VTFMFLKPRK
110 120 130 140 150
LNYMRRNPRI KDIFHNVAIE PRDVARYPKE TIIDKLTEIT TDTAYISDTL
160 170 180 190 200
HFLDPSYIVE TFQNCPKLQT LYATLVLPVE AAFKMESTHP NIYSLKYFGD
210 220 230 240 250
GFQYIPGNHG GGAYHHEFAH LQWLKVGKIK WRDPKDSFLG HLNYTTEQVE
260 270 280 290 300
MHTVTVQLQE SFAANHLYCI RRGDLLTPEV RTFGQPDRYV IPPQIFLPKV
310 320 330 340 350
HNCKKPILKK TMMQLFLYVR TVKVAKNCDI FAKVRQLIKS SDLDKYSAVE
360 370 380 390 400
LVYLVSYMEF LADLQATTCF SDTLSGGLLT KTLAPVRAWI QEKKMQLFGL
410 420 430 440 450
EDYAKLVKAV DFHPVDFSFK VETWDFRFHP LQAWKAFRPR EVSDVEEMES
460 470 480 490 500
LFSDGDLLDC FTRMPAYAVN AEEDLAAIRK TPEMDVSQEV KEPAGDRNQY
510 520 530 540 550
SNPAETFLNK LHRKHSREVK HQAVKKAKRL AEIQESMRAE GEAESNEMSR
560 570 580 590 600
GMGAIPSNAE LPSTSGAKPE LMLPTTKPVP AKWEDASFTD SSVEEEQVKL
610 620 630 640 650
PGKEAVETAT QQVIEGLPWK HWIPQLNAVG FKALEIQRDR SGTMIMPITE
660 670 680 690 700
MVSGLEKEDF PEGTPKQLAR ELLAMNRSPA TIPLDLLRAR DYGSDVKNKR
710 720 730 740 750
IGAITKTQAT SWGEYLTGKI ESLTERKVAA CVIHGAGGSG KSHAIQKALR
760 770 780 790 800
EIGKGSDITV VLPTNELRLD WSKKVPNTEP YMFKTYEKAL IGGTGSIVIF
810 820 830 840 850
DDYSKLPPGY IEALICFYSK IKLVILTGDS RQSVYHETAE DASIRHLGPA
860 870 880 890 900
TEYFSKYCRY YLNATHRNKK DLANMLGVYS ERTGVTEISM SAEFLEGIPT
910 920 930 940 950
LVPSDEKRRL YMGTGRNDTF TYAGCQGLTK PKVQIVLDHN TQVCSANVMY
960 970 980 990 1000
TALSRATDRI HFVNTSANSS AFWEKLDSTP YLKTFLSVVR EQALREYEPA
1010 1020 1030 1040 1050
EAEPIREPEP QTHMCVENEE SVLEEYKEEL LEKFDREIHS ESHGHSNCVQ
1060 1070 1080 1090 1100
TENTTIQLFS HQQAKDETLL WATIDARLKT SNQETNFREF LSKKDIGDVL
1110 1120 1130 1140 1150
FLNYQRAMGL PKERIPFSQE VWEACAHEVQ SKYLSKSKCN LINGTVRQSP
1160 1170 1180 1190 1200
DFDENKIMVF LKSQWVTKVE KLGLPKIKPG QTIAAFYQQT VMLFGTMARY
1210 1220 1230 1240 1250
MRWFRQAFQP KEVFINCETT PEDMSAWALN NWDFSRPSLA NDYTAFDQSQ
1260 1270 1280 1290 1300
DGAMLQFEVL KAKHHCIPEE IIQAYIDIKT NAQIFLGTLS IMRLTGEGPT
1310 1320 1330 1340 1350
FDANTECNIA YTHTKFDIPA GTAQVYAGDD SALDCVPEVK HSFHRLEDKL
1360 1370 1380 1390 1400
LLKSKPVITQ QKKGSWPEFC GWLITPKGVM KDPIKLHVSL KLAEAKGELK
1410 1420 1430 1440 1450
KCQDSYEIDL SYAYDHKDSL HDLFDEKQCQ AHTLTCRTLI KSGRGTVSLP

RLRNFL
Length:1,456
Mass (Da):165,625
Last modified:March 16, 2016 - v1
Checksum:iEA14E39B7D67DC3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEDG01000016 Transcribed RNA Translation: JAP38365.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GEDG01000016 Transcribed RNA Translation: JAP38365.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR027351 (+)RNA_virus_helicase_core_dom
IPR002588 Alphavirus-like_MT_dom
IPR027417 P-loop_NTPase
IPR007094 RNA-dir_pol_PSvirus
IPR001788 Tymovirus_RNA-dep_RNA_pol
PfamiView protein in Pfam
PF00978 RdRP_2, 1 hit
PF01443 Viral_helicase1, 1 hit
PF01660 Vmethyltransf, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51743 ALPHAVIRUS_MT, 1 hit
PS51657 PSRV_HELICASE, 1 hit
PS50507 RDRP_SSRNA_POS, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0V0J0I8_SOLCH
AccessioniPrimary (citable) accession number: A0A0V0J0I8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 16, 2016
Last sequence update: March 16, 2016
Last modified: December 20, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again