UniProtKB - A0A0S2Z4U5 (A0A0S2Z4U5_HUMAN)
Protein
Submitted name:
Upstream transcription factor 1 isoform 1
Gene
USF1
Organism
Homo sapiens (Human)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: Ensembl
- double-stranded DNA binding Source: Ensembl
- identical protein binding Source: Ensembl
- protein-containing complex binding Source: Ensembl
- protein dimerization activity Source: InterPro
- sequence-specific DNA binding Source: Ensembl
GO - Biological processi
- glucose metabolic process Source: Ensembl
- lipid homeostasis Source: Ensembl
- positive regulation of transcription from RNA polymerase II promoter by glucose Source: Ensembl
- response to UV Source: Ensembl
Names & Taxonomyi
Protein namesi | Submitted name: Upstream transcription factor 1 isoform 1Imported |
Gene namesi | Name:USF1Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Subcellular locationi
Nucleus
- nucleoplasm Source: HPA
Interactioni
GO - Molecular functioni
- identical protein binding Source: Ensembl
- protein dimerization activity Source: InterPro
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 199 – 254 | BHLHInterPro annotationAdd BLAST | 56 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 26 | DisorderedSequence analysisAdd BLAST | 26 | |
Regioni | 171 – 209 | DisorderedSequence analysisAdd BLAST | 39 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 251 – 295 | Sequence analysisAdd BLAST | 45 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 190 – 209 | PolyampholyteSequence analysisAdd BLAST | 20 |
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
OMAi | PECNIDY |
OrthoDBi | 1345445at2759 |
PhylomeDBi | A0A0S2Z4U5 |
Family and domain databases
CDDi | cd00083, HLH, 1 hit |
Gene3Di | 4.10.280.10, 1 hit |
InterProi | View protein in InterPro IPR011598, bHLH_dom IPR036638, HLH_DNA-bd_sf |
Pfami | View protein in Pfam PF00010, HLH, 1 hit |
SMARTi | View protein in SMART SM00353, HLH, 1 hit |
SUPFAMi | SSF47459, SSF47459, 1 hit |
PROSITEi | View protein in PROSITE PS50888, BHLH, 1 hit |
i Sequence
Sequence statusi: Fragment.
A0A0S2Z4U5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKGQQKTAET EEGTVQIQEG AVATGEDPTS VAIASIQSAA TFPDPNVKYV
60 70 80 90 100
FRTENGGQVM YRVIQVSEGQ LDGQTEGTGA ISGYPATQSM TQAVIQGAFT
110 120 130 140 150
SDDAVDTEGT AAETHYTYFP STAVGDGAGG TTSGSTAAVV TTQGSEALLG
160 170 180 190 200
QATPPGTGQF FVMMSPQEVL QGGSQRSIAP RTHPYSPKSE APRTTRDEKR
210 220 230 240 250
RAQHNEVERR RRDKINNWIV QLSKIIPDCS MESTKSGQSK GGILSKACDY
260 270 280 290 300
IQELRQSNHR LSEELQGLDQ LQLDNDVLRQ QVEDLKNKNL LLRAQLRHHG
310
LEVVIKNDSN
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 310 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | KU178379 mRNA Translation: ALQ33837.1 |
RefSeqi | NP_001263302.1, NM_001276373.1 NP_009053.1, NM_007122.4 |
Genome annotation databases
GeneIDi | 7391 |
KEGGi | hsa:7391 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | KU178379 mRNA Translation: ALQ33837.1 |
RefSeqi | NP_001263302.1, NM_001276373.1 NP_009053.1, NM_007122.4 |
3D structure databases
SMRi | A0A0S2Z4U5 |
ModBasei | Search... |
Protocols and materials databases
Antibodypediai | 3773, 351 antibodies |
Genome annotation databases
GeneIDi | 7391 |
KEGGi | hsa:7391 |
Organism-specific databases
CTDi | 7391 |
Phylogenomic databases
OMAi | PECNIDY |
OrthoDBi | 1345445at2759 |
PhylomeDBi | A0A0S2Z4U5 |
Miscellaneous databases
BioGRID-ORCSi | 7391, 2 hits in 897 CRISPR screens |
ChiTaRSi | USF1, human |
GenomeRNAii | 7391 |
Gene expression databases
ExpressionAtlasi | A0A0S2Z4U5, baseline and differential |
Family and domain databases
CDDi | cd00083, HLH, 1 hit |
Gene3Di | 4.10.280.10, 1 hit |
InterProi | View protein in InterPro IPR011598, bHLH_dom IPR036638, HLH_DNA-bd_sf |
Pfami | View protein in Pfam PF00010, HLH, 1 hit |
SMARTi | View protein in SMART SM00353, HLH, 1 hit |
SUPFAMi | SSF47459, SSF47459, 1 hit |
PROSITEi | View protein in PROSITE PS50888, BHLH, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A0S2Z4U5_HUMAN | |
Accessioni | A0A0S2Z4U5Primary (citable) accession number: A0A0S2Z4U5 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | February 17, 2016 |
Last sequence update: | February 17, 2016 | |
Last modified: | February 10, 2021 | |
This is version 33 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |