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Entry version 14 (07 Apr 2021)
Sequence version 1 (20 Jan 2016)
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Protein
Submitted name:

LPD22 domain-containing protein

Gene

BTMF_LOCUS23

Organism
Brugia timori
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
LPD22 domain-containing proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:BTMF_LOCUS23Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBrugia timoriImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri42155 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaSpirurinaSpiruromorphaFilarioideaOnchocercidaeBrugia
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000280834 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000050602 Componenti: Unplaced

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini5 – 89LPD22InterPro annotationAdd BLAST85

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili390 – 420Sequence analysisAdd BLAST31

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040738, LPD22

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18834, LPD22, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0R3Q2Z1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSVGLGANPD MEAELRKVAR RTGVPVDTAR AYPEELKRQA AMGQMDFDSL
60 70 80 90 100
AQQFPRTAGF LSGTENAKVA HDDVENMGLI ETMINSFQRG IPALKSMIPS
110 120 130 140 150
ITTANRSAGL NTFAEIDKRI AAGEDPKAVL TQYGNYGLAP LPWQSSEQAL
160 170 180 190 200
ASWNAFKARA VPLTQQAIAE SVSDIVKYQN ERNKIPLPSV VEKTMGAKTW
210 220 230 240 250
GEAFSEIGKD PVRFIAAIGP ESLVQSGPGL LAAIPAGATM GPGGAAATIG
260 270 280 290 300
GNSFLVDYAS TILESLNSAG VNTSDAEAVK AAMRDPKILE SITDQAVKHA
310 320 330 340 350
GVVGAFDALS GGIAGKMVLP QKIAGKLAAR PLAQEMANIA LQVPIQATLG
360 370 380 390 400
AAGEAGGELA AGQELQPGQI LAEAFGEFFG TPGEVVSASA KRIRERVSQA
410 420 430 440 450
QEAKANAAKL QQISDLAEAS KLRARDPDSF QEFVNQAAEN GPIKDVFIDA
460 470 480 490 500
NQLMQTGMAE QIAAVSPAVA DQLSTALATG GDIRIPIAEY AARIAGTEFN
510 520 530 540 550
QSLMDHLKTE PGGMSRAEAD LFMQNYAQEL QQSVERTLNE KQNDQEFKAA
560 570 580 590 600
ADEVKAKIKD QLDQVSRFTE PVNEAYSTMV SNFYAVMGAK LGIPPVELYS
610 620 630 640 650
RYPLTVASES LVDANVLDQT AYHGTPHRNI EKFSTDKIGT GEGAQAYGWG
660 670 680 690 700
LYFASQKDIA EWYRTKLSKP EQTNNKGQLY SVEIPEDNQM LLWDKPISQQ
710 720 730 740 750
SNEVIKKLNG VKDALTESGV LDEYLERKNL DWDELTGQDL YHILKRASLD
760 770 780 790 800
DALPENGPGI ANASVNGRDD KAASMFLYNE GVAGIKYLDG NSRTAQSGSH
810 820 830 840 850
NYVVFSGDDV EITNQFYQNK GANRGRFSPS TNTITLLKNA DLSTFLHESG
860 870 880 890 900
HFFLETMLDV AAQADAPKTI QDDVSAVFKW FGVKDLAEWQ SFDFEQKRGF
910 920 930 940 950
HEQFARGFEA YLFEGKAPSL GMQGLFQRFR AWLLNVYKDI KSLNVELNDD
960 970 980 990 1000
VRGVFDRMLA STEEIKLAEQ NQSMMPLFKD AQTAGMTPDE FAAYQSLGVD
1010 1020 1030 1040 1050
ATNNAIQELQ AKGLRDMQWL HNARGREIKR LQKESAAKRA EVESQVTDEV
1060 1070 1080 1090 1100
MSQPVYRAWS ELKSKEGAKI SPDALADMYG GNGDKYALLD WKRLSDMRMT
1110 1120 1130 1140 1150
SKERGIHPDV LAEMMGFDSG DKLVKALLAT EDPKVEIEAA TDLRMLETYG
1160 1170 1180 1190 1200
DLYSPDAIER AADRAIHNDA RSRFVATEAN ALAKATGQRK VLAAAARSFA
1210 1220 1230 1240 1250
ETMINRLKVR EVKPAQYVAA ETRSAKLADE AMRKGDLETA AAEKRNQLVN
1260 1270 1280 1290 1300
NYATRAAYEA QESVDKGLRY LDKFSKESTL KNIDAEYSDQ IFALLDRFDL
1310 1320 1330 1340 1350
RKGQSLKSID KRAALADWIN SQREQGLEPN IPDELVNEAF RKSYKDMTIE
1360 1370 1380 1390 1400
EFKGLVDSVK QIEHLGRLKN RLLTAADNRA YSDIRDSIVT SINDNANGRT
1410 1420 1430 1440 1450
ADTRTPTTNM GRMTQTLKRF WAAHIKVATW ARVMDGGKDG GPVWEYFVRS
1460 1470 1480 1490 1500
ANERGDMETT MRAEATEALS KIMAPVFALG KMGGKGQFFE SIGRSLNREA
1510 1520 1530 1540 1550
VMTIALNTGN QGNLQRLLGG EGWTTQQIAP VLATLSSVEW RAVQQIWDHF
1560 1570 1580 1590 1600
ESYRPQISAK ERRIYGTEPD WVEPTPFSVE TSDGETVALR GGYYPIKYDP
1610 1620 1630 1640 1650
AASQRAEEHA DAEGAKRQLQ GAYTSATTRR SFTKTRSEEV SGRPLLYTLA
1660 1670 1680 1690 1700
GMYSGVNDVI HDLSWHEWLI DVNRLMRSKS IDTAIRTQYG PEVKAQFKSW
1710 1720 1730 1740 1750
INDVAEGEKG AQNAGEVALS RLRQGISASG LGFNVMSAVM QPLGITQSIV
1760 1770 1780 1790 1800
RVGAPWIGKG IAKYIAAPID TTREVNSKSA FMENRARTRF RELNELRNKV
1810 1820 1830 1840 1850
QGETAVSEAI KSGAYMLMMR CQQMVDTPTW IGAYEKAIAG GNEEARAIAL
1860 1870 1880 1890 1900
ADQAVIDAQG GGQTKDLAAI ERGGPAMKLF TVFYSFMNTA LNIGVAQTMT
1910 1920 1930 1940 1950
AQSKAKLAAD YLMLYVAPPV LGYFLKAALT PGAGDEMEDP EKLAKALAAQ
1960 1970 1980 1990 2000
QLDYMMGLMV VAREFAEAAK IVTGLEDKGR DYGGPAGLRL ISDTGSFAKQ
2010 2020 2030 2040 2050
AQQGEFDDAF RKASVNLVGD MFGLPSAQIN RTITGAQAMS EGKTENPTAL

VFGYQAKK
Length:2,058
Mass (Da):225,074
Last modified:January 20, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i15871EE5CC8831BC
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
UZAG01000001 Genomic DNA Translation: VDO06519.1

Genome annotation databases

WormBase ParaSite

More...
WBParaSitei
BTMF_0000033201-mRNA-1; BTMF_0000033201-mRNA-1; BTMF_0000033201

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
UZAG01000001 Genomic DNA Translation: VDO06519.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

WBParaSiteiBTMF_0000033201-mRNA-1; BTMF_0000033201-mRNA-1; BTMF_0000033201

Family and domain databases

InterProiView protein in InterPro
IPR040738, LPD22
PfamiView protein in Pfam
PF18834, LPD22, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0R3Q2Z1_9BILA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0R3Q2Z1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: April 7, 2021
This is version 14 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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