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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ASF02_17120

Organism
Pseudomonas sp. Leaf58
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:ASF02_17120Imported
OrganismiPseudomonas sp. Leaf58Imported
Taxonomic identifieri1736226 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000051827 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini321 – 453DNA_LIGASE_A3InterPro annotationAdd BLAST133

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0Q4N7Z5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKAFAELYLQ LDATTSSTAK LQALRAYFTT APAADAAWAV YFLAGGRPRQ
60 70 80 90 100
LVPTRVLREL AGALAGLPDW LFEESYQAVG DLAETISLLV PVSHHPGDDG
110 120 130 140 150
LAHWVEAHLL PLRGLPAEEV QQRLPPLWAQ LDRPSLMLCL KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD ISHRPTAASY QQLIAAESDD
210 220 230 240 250
EHSQRGGQPY PFFLAHPLQA PSEQFDALLG PPSEWQIEWK WDGIRAQVVK
260 270 280 290 300
REGQLWVWSR GEELVTERFP ELHSLAQTLP DGVVLDGEIL VWKPSSSAAE
310 320 330 340 350
LAVQPFALLQ QRLGRKTLGK KLLSDAPVVL QAYDLLEWQG EDWRSRPQHA
360 370 380 390 400
RRQQLEQLLE QHPLAPVVLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ
410 420 430 440 450
REALYGVGRT KDMGTWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA
460 470 480 490 500
VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT
510 520 530 540 550
PTLVFELGFE GIALSKRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL

LA
Length:552
Mass (Da):61,598
Last modified:January 20, 2016 - v1
Checksum:iE84E9FDE82280474
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LMLL01000013 Genomic DNA Translation: KQN60207.1
RefSeqiWP_056802167.1, NZ_LMLL01000013.1

Genome annotation databases

EnsemblBacteriaiKQN60207; KQN60207; ASF02_17120

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LMLL01000013 Genomic DNA Translation: KQN60207.1
RefSeqiWP_056802167.1, NZ_LMLL01000013.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKQN60207; KQN60207; ASF02_17120

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0Q4N7Z5_9PSED
AccessioniPrimary (citable) accession number: A0A0Q4N7Z5
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: June 7, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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