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Entry version 19 (11 Dec 2019)
Sequence version 1 (20 Jan 2016)
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Protein
Submitted name:

Uncharacterized protein

Gene

100843512

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:100843512Imported
ORF Names:BRADI_1g18370v3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri15368 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladePooideaeBrachypodieaeBrachypodium
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008810 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini47 – 69C2H2-typeInterPro annotationAdd BLAST23
Domaini124 – 152C2H2-typeInterPro annotationAdd BLAST29

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 31DisorderedSequence analysisAdd BLAST31
Regioni182 – 268DisorderedSequence analysisAdd BLAST87
Regioni457 – 487DisorderedSequence analysisAdd BLAST31

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi193 – 212PolyampholyteSequence analysisAdd BLAST20
Compositional biasi227 – 251PolyampholyteSequence analysisAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
1318335at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00355 ZnF_C2H2, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57667 SSF57667, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A0A0Q3KUC6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLPNPPEPQP AEATAPAKKK RNLPGTPDPD AEVIALSPGT LMASNRFVCE
60 70 80 90 100
VCGKGFQRDQ NLQLHRRGHN LPWRLRQPGG AAPRRRRVYV CPDPGCVHHS
110 120 130 140 150
PARALGDLTG IKKHFCRKHG EKRWACPRCG KRYAVQADLK AHAKACGTRE
160 170 180 190 200
YRCGCGTLFT RRDSFTTHRS FCGALGEETS RVLAVPEQPS PRPPDLEELE
210 220 230 240 250
QNVDKDKENG EDNVDTDQEN ENEENSGEEK NDNSTVAEVN EPRHAEEEAV
260 270 280 290 300
MEGSHCILSP PSPLPKEQQP RVEVVPDVDE AQVVVEPIVD VKQEEEDKPN
310 320 330 340 350
DDVCFQEAYQ YDCDELKDSN LPDDVVPMLP CFLPLRSDAI GTDGSSTSCG
360 370 380 390 400
TVSSASNSIA PATTTTSTFA GLFASATTST TPQSRSLRDL IGVDPTFLCL
410 420 430 440 450
AIGASSSLFP ETSASNACTF APPPAPHMSA TALLQKAAEV GASQSSSSFL
460 470 480 490 500
KGFGLASSSS STPSREPQGR SIDSSTQSQL PQGFIDNSTP FEQSPRIFID
510 520 530 540 550
NSLPSNLPQG RFFDNTKLSS LPEGKFFDNS PPCNLPQGMS ASYSPPSKLP
560 570 580 590 600
LGQFIDNSSL PKLPQERHFD SSSLRKLPQG RYIDRLPPSM LPKGRNIGSS
610 620 630 640 650
PPCNLQQGRF FDDRAQQRHH QSNQLMDMDP EPILPRSPGL AYNSASPRLP
660 670 680 690
DLMMAQSPLF GPKPVTQDFL GLGIRRTMGD FATNGGLPAL MVGGSYI
Length:697
Mass (Da):75,729
Last modified:January 20, 2016 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4D9677A5E04C5777
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0Q3JRS5A0A0Q3JRS5_BRADI
Uncharacterized protein
100843512 BRADI_1g18370v3
719Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0Q3GWC4A0A0Q3GWC4_BRADI
Uncharacterized protein
100843512 BRADI_1g18370v3
694Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0Q3JA14A0A0Q3JA14_BRADI
Uncharacterized protein
100843512 BRADI_1g18370v3
716Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM000880 Genomic DNA Translation: KQK14737.1
CM000880 Genomic DNA Translation: KQK14743.1
CM000880 Genomic DNA Translation: KQK14749.1
CM000880 Genomic DNA Translation: PNT74591.1
CM000880 Genomic DNA Translation: PNT74592.1
CM000880 Genomic DNA Translation: PNT74593.1
CM000880 Genomic DNA Translation: PNT74594.1

NCBI Reference Sequences

More...
RefSeqi
XP_014752249.1, XM_014896763.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
KQK14737; KQK14737; BRADI_1g18370v3
KQK14743; KQK14743; BRADI_1g18370v3
KQK14749; KQK14749; BRADI_1g18370v3
PNT74591; PNT74591; BRADI_1g18370v3
PNT74592; PNT74592; BRADI_1g18370v3
PNT74593; PNT74593; BRADI_1g18370v3
PNT74594; PNT74594; BRADI_1g18370v3

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
100843512

Gramene; a comparative resource for plants

More...
Gramenei
KQK14737; KQK14737; BRADI_1g18370v3
KQK14743; KQK14743; BRADI_1g18370v3
KQK14749; KQK14749; BRADI_1g18370v3
PNT74591; PNT74591; BRADI_1g18370v3
PNT74592; PNT74592; BRADI_1g18370v3
PNT74593; PNT74593; BRADI_1g18370v3
PNT74594; PNT74594; BRADI_1g18370v3

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000880 Genomic DNA Translation: KQK14737.1
CM000880 Genomic DNA Translation: KQK14743.1
CM000880 Genomic DNA Translation: KQK14749.1
CM000880 Genomic DNA Translation: PNT74591.1
CM000880 Genomic DNA Translation: PNT74592.1
CM000880 Genomic DNA Translation: PNT74593.1
CM000880 Genomic DNA Translation: PNT74594.1
RefSeqiXP_014752249.1, XM_014896763.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblPlantsiKQK14737; KQK14737; BRADI_1g18370v3
KQK14743; KQK14743; BRADI_1g18370v3
KQK14749; KQK14749; BRADI_1g18370v3
PNT74591; PNT74591; BRADI_1g18370v3
PNT74592; PNT74592; BRADI_1g18370v3
PNT74593; PNT74593; BRADI_1g18370v3
PNT74594; PNT74594; BRADI_1g18370v3
GeneIDi100843512
GrameneiKQK14737; KQK14737; BRADI_1g18370v3
KQK14743; KQK14743; BRADI_1g18370v3
KQK14749; KQK14749; BRADI_1g18370v3
PNT74591; PNT74591; BRADI_1g18370v3
PNT74592; PNT74592; BRADI_1g18370v3
PNT74593; PNT74593; BRADI_1g18370v3
PNT74594; PNT74594; BRADI_1g18370v3

Phylogenomic databases

OrthoDBi1318335at2759

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0Q3KUC6_BRADI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0Q3KUC6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: December 11, 2019
This is version 19 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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