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Protein

Ribosomal RNA large subunit methyltransferase F

Gene

rlmF

Organism
Pseudomonas syringae pv. maculicola
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the adenine in position 1618 of 23S rRNA.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N6-methyladenine(1618) in 23S rRNA.UniRule annotationSAAS annotation

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferaseUniRule annotationSAAS annotationImported, Transferase
Biological processrRNA processingUniRule annotationSAAS annotation
LigandS-adenosyl-L-methionineUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase FUniRule annotationSAAS annotation (EC:2.1.1.181UniRule annotation)
Alternative name(s):
23S rRNA mA1618 methyltransferaseUniRule annotation
rRNA adenine N-6-methyltransferaseUniRule annotation
Gene namesi
Name:rlmFUniRule annotation
ORF Names:ALO84_03384Imported
OrganismiPseudomonas syringae pv. maculicolaImported
Taxonomic identifieri59511 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000050375 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliA0A0P9YCU6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. METTL16/RlmF family.UniRule annotationSAAS annotation

Family and domain databases

HAMAPiMF_01848 23SrRNA_methyltr_F, 1 hit
InterProiView protein in InterPro
IPR016909 rRNA_lsu_MeTfrase_F
IPR010286 rRNA_lsu_MeTfrase_F-like
IPR029063 SAM-dependent_MTases
PANTHERiPTHR13393 PTHR13393, 1 hit
PfamiView protein in Pfam
PF05971 Methyltransf_10, 1 hit
PIRSFiPIRSF029038 Mtase_YbiN_prd, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0P9YCU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDTPKPPRK KPQRPAKPAA PREKATLHPR NRHQGHYDFP KLIKSSPELA
60 70 80 90 100
AFVILNPYGK ESIDFANPQA VRVFNRALLK AFYGIAHWDI PADYLCPPIP
110 120 130 140 150
GRADYLHFLA DVLAEDHEGV IPRGASVKAL DIGTGANCIY PLLGHSDYGW
160 170 180 190 200
QFVGSDIDST AVAAATAIVK ANGLHKAISV RLQGNRKQIL LGLCDSNERF
210 220 230 240 250
DVSLCNPPFH ASLDEAQRGS QRKWRALGKA DPKRKLPVLN FGGQSQELWC
260 270 280 290 300
EGGEIGFVTQ LIQESARLPG LVVWFSTLVS KASNLPPIQS ALKKAGALEV
310 320
KVVEMGQGQK QSRFVAWTFL DKAQRTPG
Length:328
Mass (Da):35,981
Last modified:January 20, 2016 - v1
Checksum:i72853034D5029815
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LJQR01000066 Genomic DNA Translation: KPX74702.1
RefSeqiWP_032621684.1, NZ_LJQR01000066.1

Genome annotation databases

EnsemblBacteriaiKPX74702; KPX74702; ALO84_03384
PATRICifig|59511.11.peg.1648

Similar proteinsi

Entry informationi

Entry nameiA0A0P9YCU6_PSEYM
AccessioniPrimary (citable) accession number: A0A0P9YCU6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 20, 2016
Last sequence update: January 20, 2016
Last modified: June 7, 2017
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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