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Entry version 22 (16 Oct 2019)
Sequence version 1 (11 Nov 2015)
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Protein

Methionine S-methyltransferase

Gene

LR48_Vigan09g275400

Organism
Phaseolus angularis (Azuki bean) (Vigna angularis)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Methionine S-methyltransferasePROSITE-ProRule annotation (EC:2.1.1.12PROSITE-ProRule annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:LR48_Vigan09g275400Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPhaseolus angularis (Azuki bean) (Vigna angularis)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3914 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideae50 kb inversion cladeNPAAA cladeindigoferoid/millettioid cladePhaseoleaeVigna
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000053144 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini116 – 166MTSInterPro annotationAdd BLAST51
Domaini732 – 1079Aminotran_1_2InterPro annotationAdd BLAST348

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation

Phylogenomic databases

KEGG Orthology (KO)

More...
KOi
K08247

Identification of Orthologs from Complete Genome Data

More...
OMAi
LGANGHY

Database of Orthologous Groups

More...
OrthoDBi
93776at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.640.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR004839 Aminotransferase_I/II
IPR025779 Met_S-MeTrfase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
IPR029063 SAM-dependent_MTases
IPR007848 Small_mtfrase_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00155 Aminotran_1_2, 1 hit
PF05175 MTS, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53335 SSF53335, 1 hit
SSF53383 SSF53383, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51555 SAM_MT12, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0L9VGB7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSWETVDEFL VQCKQSSDAA YASLRSLLER LENTETRSQA RIFLSHLQKR
60 70 80 90 100
FPTKDSCDQC FQTYHFRIED VSLGQYEGHQ GRNKLTTMVI PSIFLPEDWS
110 120 130 140 150
FTFYEGINRH PDSIFKERTI AELGCGNGWI SIAIAEKWLP SKVYGLDINP
160 170 180 190 200
RAVKISWINL YLNALDENGQ PVYDREKKTL LDRVEFHESD LLSYCRENDI
210 220 230 240 250
QLERIVGCIP QILNPNPDAM SKVITENASE EFLHSLSNYC ALQGFMEDQF
260 270 280 290 300
GLGLIARAVE EGIAVIKPTG IMIFNMGGRP GHGVCERLFE RRGFRITKLW
310 320 330 340 350
QTKIIQAGDT DIAALVEIEK NSPHRFEFFM GLSGDQPICA RTAWAYGKSG
360 370 380 390 400
GSISHALSVY SCELRRPNQV KVIFDFLKHG FQEISSSLDL SFEEDSVADE
410 420 430 440 450
KIPFLAYLAS TLKSNSFFPY EPPAGSIHFR NLIAGFLKTY HHIPLTADNV
460 470 480 490 500
VIFPSRTAAI ENALRLFSPR LAVVDEHLTR HLPRLWLTSS ALESTGAIHS
510 520 530 540 550
SDDTIMVIEA PRQSDLMIEL IKKLKPKVVV TGIAHFEAVT SSAFVHLLDT
560 570 580 590 600
TRDIGSRLFL DISDHFELSS IPGSNGVLKY LSGTALPSHA AIICGLVKNK
610 620 630 640 650
VYPDLEVAFV ISEEESLFNA LSKTVELLEG NTALISQYYY GCIFHELLAF
660 670 680 690 700
QLAGRHAPAK RNCENVKSVD MIGFASSASL VLKNAELSID RVENGSVIHM
710 720 730 740 750
DVDQIFLPVP SPVKAAIFES FARQNMSESE IDVTSSIKRF VKSSYGFPTD
760 770 780 790 800
NGTEFIYADS SKALFNKLVL CCINEGGTLC FPAGSNGNYV SSARFLKADI
810 820 830 840 850
VTAPTDVNVG FKFTKKTLTG ILGTVKNPWV YISGPTVNPT GLIYSNNEMV
860 870 880 890 900
EILSTCARFG ARVIIDTAAS GLEFDSEGWG GWDIEGCLSK LDSSIKPSFC
910 920 930 940 950
VSLLGGLSLK MLNGVLRFGF LILNQPVLVD TFYSYPGLSK PHTTVRYATK
960 970 980 990 1000
KLLELREQKP SDLSDAIVEH TEILRTRSKL LKQVLEKSGW DVLESCTGVS
1010 1020 1030 1040 1050
VVAKPSAYLN KTIKLKLSPK GEGDHGSATE EVKLDDCNIR TVILKATGLC
1060 1070 1080 1090
INSGSWTGIP GYCRFNIALE ENDFKKALDC ILKFREVALG
Length:1,090
Mass (Da):120,981
Last modified:November 11, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD8E855C434977AFA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM003379 Genomic DNA Translation: KOM54095.1

NCBI Reference Sequences

More...
RefSeqi
XP_017436733.1, XM_017581244.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
KOM54095; KOM54095; LR48_Vigan09g275400

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
108343150

Gramene; a comparative resource for plants

More...
Gramenei
KOM54095; KOM54095; LR48_Vigan09g275400

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
var:108343150

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM003379 Genomic DNA Translation: KOM54095.1
RefSeqiXP_017436733.1, XM_017581244.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblPlantsiKOM54095; KOM54095; LR48_Vigan09g275400
GeneIDi108343150
GrameneiKOM54095; KOM54095; LR48_Vigan09g275400
KEGGivar:108343150

Phylogenomic databases

KOiK08247
OMAiLGANGHY
OrthoDBi93776at2759

Family and domain databases

Gene3Di3.40.640.10, 2 hits
InterProiView protein in InterPro
IPR004839 Aminotransferase_I/II
IPR025779 Met_S-MeTrfase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
IPR029063 SAM-dependent_MTases
IPR007848 Small_mtfrase_dom
PfamiView protein in Pfam
PF00155 Aminotran_1_2, 1 hit
PF05175 MTS, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit
SSF53383 SSF53383, 2 hits
PROSITEiView protein in PROSITE
PS51555 SAM_MT12, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0L9VGB7_PHAAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0L9VGB7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: October 16, 2019
This is version 22 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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