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Protein
Submitted name:

PRP4p Splicing factor

Gene

KO01_05287

Organism
Saccharomyces sp. 'boulardii'
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
PRP4p Splicing factorImported
Gene namesi
ORF Names:KO01_05287Imported
OrganismiSaccharomyces sp. 'boulardii'Imported
Taxonomic identifieri252598 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000037662 Componenti: Chromosome XVI

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

ProteinModelPortaliA0A0L8VH51
SMRiA0A0L8VH51
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 465WD_REPEATS_REGIONInterPro annotationAdd BLAST295
Repeati261 – 302WDPROSITE-ProRule annotationAdd BLAST42
Repeati303 – 344WDPROSITE-ProRule annotationAdd BLAST42
Repeati345 – 386WDPROSITE-ProRule annotationAdd BLAST42
Repeati433 – 465WDPROSITE-ProRule annotationAdd BLAST33

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili129 – 149Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, WD repeatPROSITE-ProRule annotation

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR027106 Prp4
IPR014906 PRP4-like
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR19846 PTHR19846, 1 hit
PfamiView protein in Pfam
PF00400 WD40, 4 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00500 SFM, 1 hit
SM00320 WD40, 7 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 3 hits
PS50082 WD_REPEATS_2, 4 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0L8VH51-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKYIALENL PVDLQHKGAT QNESTADILK QLPHERLQAV LEKIPEEDLE
60 70 80 90 100
VRRLLSILKK PEVVENEDVQ QRRIRLAEIL MVDEIDLENI NNMENINGEE
110 120 130 140 150
VDEEDDEDFF TPATSELIFA RRFLINYSLE RSRKRLQKEM ERHQKFNTRQ
160 170 180 190 200
ELLSRRTELQ RMANLELAGS QLVSTKPISA VSLSTDDMVV ATGSWAGDLQ
210 220 230 240 250
VLNSQTLQPL TQKLDSHVGK IGAIDWHPDS NNQMISCAED GLIKNFQYSN
260 270 280 290 300
EEGGLRLLGD LVGHERRISD VKYHPSGKFI GSASHDMTWR LWDASTHQEL
310 320 330 340 350
LLQEGHDKGV FSLSFQCDGS LVCSGGMDSL SMLWDIRSGS KVMTLAGHSK
360 370 380 390 400
PIYTVAWSPN GYQVATGGGD GIINVWDIRK RDEGQLNQIL AHRNIVTQVR
410 420 430 440 450
FSKEDGGKKL VSCGYDNLIN VYSSDTWLKM GSLAGHTDKI ISLDISNNSH
460
FLVSGGWDRS IKLWN
Length:465
Mass (Da):52,442
Last modified:November 11, 2015 - v1
Checksum:i7CCCA3A92AC0CE78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LIIL01000028 Genomic DNA Translation: KOH47517.1

Genome annotation databases

EnsemblFungiiKOH47517; KOH47517; KO01_05287

Similar proteinsi

Entry informationi

Entry nameiA0A0L8VH51_9SACH
AccessioniPrimary (citable) accession number: A0A0L8VH51
Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: February 28, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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