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Entry version 19 (29 Sep 2021)
Sequence version 1 (11 Nov 2015)
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Protein

DUF294_C domain-containing protein

Gene

AMSG_03414

Organism
Thecamonas trahens ATCC 50062
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DUF294_C domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AMSG_03414Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiThecamonas trahens ATCC 50062Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri461836 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaApusozoaApusomonadidaeThecamonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000054408 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini782 – 841DUF294_CInterPro annotationAdd BLAST60

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
998802at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.80.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018821, DUF294_put_nucleoTrafse_sb-bd
IPR032675, LRR_dom_sf
IPR043519, NT_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF10335, DUF294_C, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF81301, SSF81301, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0L0D3R3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASPAAVPLA DFIESHPLPL ARACVFAQLA AALAALHASG RAHGSLGPDA
60 70 80 90 100
VVVNNATGDV HVVPPLDTYS VPHPADLVAL TALTETPDGL TASDIVAEIV
110 120 130 140 150
SSLDNPLDML AVLRACFSGE CPADLAPCLP LGDLFLPLVK AWLASDASRA
160 170 180 190 200
IREHLVEDLC GSLVDDALMR LDTAHASLTA IFAALARCLT RAIIPFELAA
210 220 230 240 250
NVNDGAVSMP ILVLACKLSS HAALSSLPTI RRLRAYFLAL EGEHLGALAV
260 270 280 290 300
SALALSISRG YLSSTRLAAL FISEAVTILD SLLADAVDTA PINSDATSVR
310 320 330 340 350
DLDMAAPNSL LLVVTEAAFT SVLSHYVSAA VTNPVPLSLT TLSLSLVPSV
360 370 380 390 400
LTSPAELHTA FDRLLFMTHT MIRLHRFDSA ASVLDAASEL VTAYPELASQ
410 420 430 440 450
SSCLAAERAR LRDDDVAAAA AAELAAAEVR EHRGILSFIR AATALVAGGE
460 470 480 490 500
LSGCSLLHDP LPDVLPPYYL RKVATRLDSL PLDDELAAVL AGPLDVASFV
510 520 530 540 550
VSVLQAPALQ ASVAGPRGAF IVHDVFHALA MAFLELLLEK ATLILGIPPS
560 570 580 590 600
AFTLVGLGSV ARGEMAPFSD LDIVFLVEPD IVLAPECPSL PAGGRDDYFL
610 620 630 640 650
RLAHLLELFL LTVGETGYQL GPVSSWSPRG FRLDEAALSP LVTRATPASL
660 670 680 690 700
VAKQRRELIS LLTPPLDSDY LDPIAHSLRT AAYIAGDANL FTSYKKALDA
710 720 730 740 750
FFDRRLMATL VETEAGVAVC EDAALALHPD TPVRRAYALL ALAKNTGAER
760 770 780 790 800
TFSPWLVDRA LLVPDAEVTV DVKTDLQRFP MLLVDGLALF FGVSAVSTLA
810 820 830 840 850
RLDALYDAGV FNVAVRDALV HAFGFALGLR MVAQLARGEE NDVLLPSMAT
860 870 880 890 900
PKLVAEIREL VAKVLCPIQT MASHFVTGMI ETLARESKPV FEPGTLVRLP
910 920 930 940 950
FRDLGYLTET RWRASLDDIS DVMYSFGQLD PNAVYTGFGL GMGSVTSWCS
960 970 980 990 1000
LGISAHRAEM PRWRDFLDSR DAFCAAAAAE DNGAYFYSAC SDEVRKLRPD
1010 1020 1030 1040 1050
AVAQLFSGST VTRAYDHGVR AVATVGNFHF KLDPELPAME LAVHVIGRVL
1060 1070 1080 1090 1100
FRGNRTNASP HPGGTPRVDV IKLYFGAEAH YFLVSETVAG PTLKQLWASA
1110 1120 1130 1140 1150
GHNVENYDAA LSRVDTPISY DPFSFTQQVL LALVTNPEDG KEDNYVCEAV
1160 1170 1180 1190 1200
DPEQLAYRIV PIDNDHSFVS AVTKSGFFSK RIPRLKCILF CMQEMHDAVD
1210 1220 1230 1240 1250
ADLRDYMLYS VHADALLDVW VDVLEAIDAR MASFELPHVR KDMADTEGKP
1260 1270 1280 1290 1300
TLDVLFKPGL VHVLYHKITL IQEVLRGSRV THMQLLGAVE HELMTLYARA
1310 1320 1330 1340 1350
FQEAMNPWAR FHLLTESQYK RGRRGLVTLT PSLVVRREQQ CRVVTTADER
1360 1370 1380 1390 1400
TSSLWADLTM VSPADLRSEL NDLAHEQADA AVTALFSRSD LRPFRALRLP
1410 1420 1430 1440 1450
LFKEAFVERL NFGLFSFPAK LQREVLKALV GTLFRKLVLA HCVELDDKSL
1460 1470 1480 1490 1500
ARIIGRCDHL QWLDVSYCSK LVTVGSVAKL AAASICRLDL RGCANVPLAV
1510 1520 1530 1540 1550
VVDIEARCRS LSYLALPEQL GAGLLDAEHH VPLDPRFFLH GQPDLVWSQL
1560 1570 1580 1590 1600
EPRLQFGLSL LVPPQALTQL NKYAKRLRMD LSGADLRDPI VRNVAKVLPH
1610 1620 1630 1640 1650
TSAVVSVNIA WNRVSGPVLV ELAQAFAANP LIFACDISFN GPAAPDELAA
1660 1670 1680 1690 1700
LADVDAALAT TNALELEAVG EDLDALAKLR LRNLVWNGLA DSYHNSLCRK
1710 1720 1730 1740 1750
LLRDRSPHLL YKSLAFKRVA QFGFSLPAPV TTALELVDGR IVLGMTNGSC
1760 1770 1780 1790 1800
VVYRPPSDLP PTSAVTEVLS PEEVAERASA QASRGAAASA HAVAVGPFPG
1810 1820 1830 1840 1850
YDSPVTAVAE SDRGALLVGT AAGDVLVLQV VARDPRSGEV IKWHLVRTLD
1860 1870 1880 1890 1900
RSTYVRSSAG SAGGAPSDEH PIGRRDPTVK ALVALPKKRV LVLIEGSVLD
1910 1920 1930 1940 1950
YKTSTGARVA LKADPSLPAL AQYRFAEFGE LIHALAPLAD WRMVTASAKS
1960 1970 1980 1990 2000
VVVWLLLADG TGWSLVASAK LGGVTHLAIL PNQRISALAC GERGEPLRVV
2010 2020 2030 2040 2050
TLALDSDASL PKLVQIQEMP APGTATPRGL CVSGSGLLAS HWAGAAGNPA
2060 2070 2080 2090 2100
RLTLWDSREK PFMVQAAQSR RVLRDTSAAA ASRGAGDTVN VHHEQGLIPV
2110 2120 2130
LALDVPDDSS FLLVSRLAPV IYELDVSSLA LWALRGANA
Length:2,139
Mass (Da):229,782
Last modified:November 11, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i145D961B33AF00B5
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
GL349444 Genomic DNA Translation: KNC46982.1

NCBI Reference Sequences

More...
RefSeqi
XP_013760251.1, XM_013904797.1

Genome annotation databases

Ensembl protists genome annotation project

More...
EnsemblProtistsi
KNC46982; KNC46982; AMSG_03414

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
25563021

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL349444 Genomic DNA Translation: KNC46982.1
RefSeqiXP_013760251.1, XM_013904797.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblProtistsiKNC46982; KNC46982; AMSG_03414
GeneIDi25563021

Phylogenomic databases

OrthoDBi998802at2759

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR018821, DUF294_put_nucleoTrafse_sb-bd
IPR032675, LRR_dom_sf
IPR043519, NT_sf
PfamiView protein in Pfam
PF10335, DUF294_C, 1 hit
SUPFAMiSSF81301, SSF81301, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0L0D3R3_THETB
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0L0D3R3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: September 29, 2021
This is version 19 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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