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Protein
Submitted name:

Egg-laying defective protein 27

Gene

egl-27

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Egg-laying defective protein 27Imported
Gene namesi
Name:egl-27Imported
ORF Names:C04A2.3Imported, CELE_C04A2.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC04A2.3h ; CE50516 ; WBGene00001194 ; egl-27

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Structurei

3D structure databases

SMRiA0A0K3AWS4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini53 – 189BAHInterPro annotationAdd BLAST137
Domaini190 – 293ELM2InterPro annotationAdd BLAST104
Domaini298 – 350SANTInterPro annotationAdd BLAST53
Domaini399 – 455GATA-typeInterPro annotationAdd BLAST57

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili867 – 912Sequence analysisAdd BLAST46
Coiled coili942 – 1004Sequence analysisAdd BLAST63

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00580000081398

Family and domain databases

CDDicd00202 ZnF_GATA, 1 hit
InterProiView protein in InterPro
IPR001025 BAH_dom
IPR000949 ELM2_dom
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
IPR000679 Znf_GATA
PfamiView protein in Pfam
PF01426 BAH, 1 hit
PF01448 ELM2, 1 hit
PF00320 GATA, 1 hit
SMARTiView protein in SMART
SM00439 BAH, 1 hit
SM01189 ELM2, 1 hit
SM00717 SANT, 1 hit
SM00401 ZnF_GATA, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51038 BAH, 1 hit
PS51156 ELM2, 1 hit
PS50114 GATA_ZN_FINGER_2, 1 hit
PS51293 SANT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 14 potential isoforms that are computationally mapped.Show allAlign All

A0A0K3AWS4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MENDDEPEFS QKHYDIEPCY YSLTGKSDRN CRGIVYRYRQ DSDLKGFQSH
60 70 80 90 100
DGTLYRLRDS VFVEVSQNEP YVIAAICGFK YTKRDHVVVK LTRYFRADDI
110 120 130 140 150
PEISLNLMKQ ERAELEINPH LCPQSLNREL FNSELQITQP VSCLRGKCIV
160 170 180 190 200
EYVKDVRHAR TVADFSLDND TFFFCLHYNQ DSTKLASTHY AIRVGTSFQA
210 220 230 240 250
TLPPMAECSV GDDSDRDELL YRPNSIESGE EEDYIKLARC YRTYTLSGNH
260 270 280 290 300
MLDSQKNARS LQVSDLLMDE AIIQLHRSGY KIDDALSELN ANDIILTTDV
310 320 330 340 350
DNMTQDDAKK FAKGIKQLGK NFSRIHRELL PHHSREQLVS YYYLWKKTPE
360 370 380 390 400
ATKPKQAARR VNPTSIKRPT KEKVKASRPT STEYLDFDSA SESDVENNGP
410 420 430 440 450
SGRACHHCYG AESKDWHHAN GLLLCTDCRL HYKKYGQLRQ IANRPSQVPA
460 470 480 490 500
CLFKRSNSDE EESGVRTRAG KKEQRRRTPS SMSETPDRRS PSTVSNGAPN
510 520 530 540 550
LTAEETPTKK LNGSVKRAPK RPLHNGVINN VEKSNSSEEP ASPTTPPPTL
560 570 580 590 600
TNGLTNGHGP ESSTPNGETI SKRMKVEPSY DDDDDEEEGK MTIDEGDDDP
610 620 630 640 650
MPVLNGFKKE ESVEEIKLEL NGTIKKENGV ETDPTTPTCS MEAENEVCET
660 670 680 690 700
PAVVSVEIRD ETNGETNSDL KDDENVEPDS PEDTFELGSN VEFETKNAMF
710 720 730 740 750
VRSIVRSCGP RCARTDLIFK IKVGGVWEKS IKEKEERKKV HLQNQRIQDS
760 770 780 790 800
EKVAIQQNQI KKEQQQSQPT PQQIHQQQAQ QNAQHLQQLQ QAVMLGHLPP
810 820 830 840 850
EVLRQMMPPQ FGVDPTAILM QQMMAGQQSQ GVNAAFQHQM ALQQQLEAHQ
860 870 880 890 900
VQFQLMMAHQ HQQKMIAEQQ QQQRHAAAQQ LREREQREQR ERERERQHQQ
910 920 930 940 950
QAQQALHQQQ QQHAAAAANQ LNPAMMQMMA LMANSAASQQ DIARLMEMAA
960 970 980 990 1000
QQQQQQQQAA QAQAQRDQER ERREREARER EAAREREREQ AAREAAARDQ
1010 1020 1030 1040 1050
AAREHAQAVQ AAAAAAQQAQ ALTPDMQHMH LLQQLMLNPA LMMQLQQAQA
1060 1070 1080 1090
QQQQQQPQVT NPLQMLQHGM AAQSANQAEM MRRIHPEPAM RPQHQ
Length:1,095
Mass (Da):124,708
Last modified:November 11, 2015 - v1
Checksum:i2407958D981E1EDE
GO

Computationally mapped potential isoform sequencesi

There are 14 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q09228EGL27_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3
1,129Annotation score:
A0A0K3AQX3A0A0K3AQX3_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,090Annotation score:
A0A0K3AWS8A0A0K3AWS8_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
988Annotation score:
A0A0K3ATV0A0A0K3ATV0_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,127Annotation score:
A0A0K3ATV6A0A0K3ATV6_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
983Annotation score:
A0A0K3AQW8A0A0K3AQW8_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,126Annotation score:
A0A0K3ATV3A0A0K3ATV3_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,092Annotation score:
A0A0K3AUG2A0A0K3AUG2_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,124Annotation score:
A0A0K3ARG6A0A0K3ARG6_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
986Annotation score:
A0A0K3ARG1A0A0K3ARG1_CAEEL
Egg-laying defective protein 27
egl-27 C04A2.3, CELE_C04A2.3
1,093Annotation score:
There are more potential isoformsShow all

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA Translation: CTQ86436.1
RefSeqiNP_001300497.1, NM_001313568.1
UniGeneiCel.17167

Genome annotation databases

EnsemblMetazoaiC04A2.3h; C04A2.3h; WBGene00001194
GeneIDi174121

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA Translation: CTQ86436.1
RefSeqiNP_001300497.1, NM_001313568.1
UniGeneiCel.17167

3D structure databases

SMRiA0A0K3AWS4
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC04A2.3h; C04A2.3h; WBGene00001194
GeneIDi174121

Organism-specific databases

CTDi174121
WormBaseiC04A2.3h ; CE50516 ; WBGene00001194 ; egl-27

Phylogenomic databases

GeneTreeiENSGT00580000081398

Family and domain databases

CDDicd00202 ZnF_GATA, 1 hit
InterProiView protein in InterPro
IPR001025 BAH_dom
IPR000949 ELM2_dom
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
IPR000679 Znf_GATA
PfamiView protein in Pfam
PF01426 BAH, 1 hit
PF01448 ELM2, 1 hit
PF00320 GATA, 1 hit
SMARTiView protein in SMART
SM00439 BAH, 1 hit
SM01189 ELM2, 1 hit
SM00717 SANT, 1 hit
SM00401 ZnF_GATA, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51038 BAH, 1 hit
PS51156 ELM2, 1 hit
PS50114 GATA_ZN_FINGER_2, 1 hit
PS51293 SANT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0K3AWS4_CAEEL
AccessioniPrimary (citable) accession number: A0A0K3AWS4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: October 10, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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