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Entry version 28 (12 Aug 2020)
Sequence version 1 (11 Nov 2015)
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Protein
Submitted name:

HUN domain-containing protein

Gene

pqn-80

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
HUN domain-containing proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pqn-80Imported
ORF Names:CELE_Y111B2A.14Imported, Y111B2A.14Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegansImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome III

Organism-specific databases

WormBase

More...
WormBasei
Y111B2A.14f ; CE50492 ; WBGene00004161 ; pqn-80

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PeptideAtlas

More...
PeptideAtlasi
A0A0K3ARB4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A0A0K3ARB4, baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 144DisorderedSequence analysisAdd BLAST144
Regioni324 – 343DisorderedSequence analysisAdd BLAST20
Regioni550 – 587DisorderedSequence analysisAdd BLAST38
Regioni723 – 768DisorderedSequence analysisAdd BLAST46
Regioni791 – 871DisorderedSequence analysisAdd BLAST81
Regioni914 – 1226DisorderedSequence analysisAdd BLAST313

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 20PolarSequence analysisAdd BLAST20
Compositional biasi38 – 55PolyampholyteSequence analysisAdd BLAST18
Compositional biasi96 – 111PolarSequence analysisAdd BLAST16
Compositional biasi119 – 137PolarSequence analysisAdd BLAST19
Compositional biasi553 – 587PolarSequence analysisAdd BLAST35
Compositional biasi796 – 837PolyampholyteSequence analysisAdd BLAST42
Compositional biasi932 – 971PolarSequence analysisAdd BLAST40
Compositional biasi978 – 1032PolarSequence analysisAdd BLAST55
Compositional biasi1045 – 1217PolarSequence analysisAdd BLAST173

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 17 potential isoforms that are computationally mapped.Show allAlign All

A0A0K3ARB4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGAPPSIRM VSSSSSLKKL PAPRKPSPPP AVEPTRSVEI IEKPEKTEKP
60 70 80 90 100
AEKRKTAATT SALEPAEKKK KPDSSSSSEE IILIDDNAPA AKKQPESAQK
110 120 130 140 150
GSTTVTMSAK KICKQQEEIA KQKPSSSSVT PSKPAAPTAS TPKKEEIGTL
160 170 180 190 200
ETFLKNIFAN LDAKGKLYQE KKLKTFDTET LKEITTFIDV MKHHKTEKVN
210 220 230 240 250
MEPLIYSLAK SFGMTTQEVM KQVEQEISSK KATTPKPSTN AVLSTISSQK
260 270 280 290 300
SLEKNAADWK LTQTDLPTMG EKDIQMLTTI VRSWKSKKEI SNSMVTGWLK
310 320 330 340 350
DVNQLKMNAD QARKKFFDII NTLPDSSEKN GGGGQQDAND IPKHERSRKA
360 370 380 390 400
RMFLHQWVYL SRKFLELQLP KLKHHSPPVE GLAKKQVIAA NAIKEGVRKQ
410 420 430 440 450
ISLFENKKET SSRLPGDPVY VFQFTEPVLT AVAPYLEDLV DYALAAKKIE
460 470 480 490 500
LIVSGIDALH QSTDGKITII QFYIEICRRL QKLSFLAVEE PMKSRLKEAN
510 520 530 540 550
EQIMKHQVVQ IPKYQLKWPD GQAEPSLKGL NRELYEFDKS ILSMVAAKPS
560 570 580 590 600
APATPKASSS TALRPSTSST PSQQQSTSTA KAMTSSSTSA EDAKRLLAMN
610 620 630 640 650
QLVQVYAGKY LLPTGNSTAD ICDPTICLMN DDILLIMVTA VYSCGIPLVN
660 670 680 690 700
QMNMLKNVLC QVGQTRMAQT LATQKTQNKQ CLTQNDYQLL FDYFGKFEKA
710 720 730 740 750
LEQRKAKKEE AERLKKLEEK LKKEKEKQAE KDRIEAKKFE ERMKKEQEKQ
760 770 780 790 800
EEKERKEREK REEKERKERE IREIMERKKR EEDDRIAAKL QIAQQLENDR
810 820 830 840 850
KMREAEESAR KETERRAKME TERKVAEARR AVERENQIKM MRAQQLQRRQ
860 870 880 890 900
EEAPPPQQAP APHTQKIQVK NEPVDHSFDI LKEAEKDAHI IPTKSIKAEP
910 920 930 940 950
LDVQKPLSAF EKLASLRGRT QSADMRRGGD STEMPNVTQQ YQAEQNHLAQ
960 970 980 990 1000
SSNNSQYNAP STSSQPQHFP TEPSIRQPPP QQSYNSNQML QNPRQQPQNQ
1010 1020 1030 1040 1050
IVQNFQSAPQ RHPHQNPQIA TSSSSGGVNQ FYNNGGAAPP VVEQQAANRR
1060 1070 1080 1090 1100
SSFTMSHSVQ QHQSPLQQQF PINSYQSPSH HNNSSSMSNS SLMQTPHSNS
1110 1120 1130 1140 1150
SMIARSPQFP SHTSPMSQRF HTPPSVGHQM VQSPLSQPNP SPLQHFNFSP
1160 1170 1180 1190 1200
HSSSFSSQRP QMPPQRQMSQ QNLMHQQQQP QNHTQHQYQH QTFSSQQQQL
1210 1220
QQHQHQIRHQ MNTNYPPPPG YNHHGH
Length:1,226
Mass (Da):138,777
Last modified:November 11, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7C15A96EEC8DF2AB
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 17 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
C7IVS6C7IVS6_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,446Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3AX73A0A0K3AX73_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,449Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C7IVS5C7IVS5_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,416Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3ARW1A0A0K3ARW1_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,419Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3ARB9A0A0K3ARB9_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,063Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3ARW5A0A0K3ARW5_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,066Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3ARX0A0A0K3ARX0_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
560Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3AU63A0A0K3AU63_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,256Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3AU69A0A0K3AU69_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
1,036Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0K3AU76A0A0K3AU76_CAEEL
HUN domain-containing protein
pqn-80 CELE_Y111B2A.14, Y111B2A.14
387Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
There are more potential isoformsShow all

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CTQ86590.1

NCBI Reference Sequences

More...
RefSeqi
NP_001299890.1, NM_001312961.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
Y111B2A.14f.1; Y111B2A.14f.1; WBGene00004161
Y111B2A.14f.2; Y111B2A.14f.2; WBGene00004161
Y111B2A.14f.3; Y111B2A.14f.3; WBGene00004161

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
176683

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA Translation: CTQ86590.1
RefSeqiNP_001299890.1, NM_001312961.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Proteomic databases

PeptideAtlasiA0A0K3ARB4

Genome annotation databases

EnsemblMetazoaiY111B2A.14f.1; Y111B2A.14f.1; WBGene00004161
Y111B2A.14f.2; Y111B2A.14f.2; WBGene00004161
Y111B2A.14f.3; Y111B2A.14f.3; WBGene00004161
GeneIDi176683

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
176683
WormBaseiY111B2A.14f ; CE50492 ; WBGene00004161 ; pqn-80

Gene expression databases

ExpressionAtlasiA0A0K3ARB4, baseline and differential

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0K3ARB4_CAEEL
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0K3ARB4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: August 12, 2020
This is version 28 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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