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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Mycobacterium goodii
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotation
ORF Names:AFA91_31140Imported
OrganismiMycobacterium goodiiImported
Taxonomic identifieri134601 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycolicibacterium
Proteomesi
  • UP000062255 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK02871

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit

Sequencei

Sequence statusi: Complete.

A0A0K0XE15-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPTYTPKAGD TTRSWYVIDA SDVVLGRLAS AAATLLRGKH KPTFTPNVDG
60 70 80 90 100
GDFVIVINAD KIAVSGDKLT KKFAYRHSGY PGGLRKRTIG ELLEKHPTRV
110 120 130 140
VENAIIGMLP HNKLGRQIQK KLKVYAGPDH PHAAQQPVPY EIKQVAQ
Length:147
Mass (Da):16,121
Last modified:November 11, 2015 - v1
Checksum:i78FC0F000F9925A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012150 Genomic DNA Translation: AKS35626.1
RefSeqiWP_049748082.1, NZ_CP012150.1

Genome annotation databases

EnsemblBacteriaiAKS35626; AKS35626; AFA91_31140
KEGGimgo:AFA91_31140
PATRICifig|134601.6.peg.6442

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012150 Genomic DNA Translation: AKS35626.1
RefSeqiWP_049748082.1, NZ_CP012150.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKS35626; AKS35626; AFA91_31140
KEGGimgo:AFA91_31140
PATRICifig|134601.6.peg.6442

Phylogenomic databases

KOiK02871

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0K0XE15_MYCGD
AccessioniPrimary (citable) accession number: A0A0K0XE15
Entry historyiIntegrated into UniProtKB/TrEMBL: November 11, 2015
Last sequence update: November 11, 2015
Last modified: June 20, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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