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Entry version 23 (16 Jan 2019)
Sequence version 1 (14 Oct 2015)
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Protein

Putative testis-expressed protein 13C

Gene

TEX13C

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein uncertaini <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

Could be the product of a pseudogene. This gene is longer than the rat and mouse orthologs and also contains a RanBP2-type zinc finger which is not present in those orthologs.Curated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri955 – 984RanBP2-typePROSITE-ProRule annotationAdd BLAST30

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Putative testis-expressed protein 13CCurated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TEX13CImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
HostDB:ENSG00000282815.1

Human Gene Nomenclature Database

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HGNCi
HGNC:52277 TEX13C

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_A0A0J9YWL9

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
TEX13C

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004358741 – 993Putative testis-expressed protein 13CAdd BLAST993

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
A0A0J9YWL9

PRoteomics IDEntifications database

More...
PRIDEi
A0A0J9YWL9

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
A0A0J9YWL9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
A0A0J9YWL9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000282815 Expressed in 3 organ(s), highest expression level in right testis

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
A0A0J9YWL9

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
A0A0J9YWL9

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the TEX13 family.

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri955 – 984RanBP2-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Zinc-finger

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000161768

Identification of Orthologs from Complete Genome Data

More...
OMAi
KDPVMPQ

Database of Orthologous Groups

More...
OrthoDBi
671563at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR028193 TEX13
IPR001876 Znf_RanBP2

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15186 TEX13, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01358 ZF_RANBP2_1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0J9YWL9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAMNFGDHAS GFRHDDVIRF INNEVLRNGG SPAFYTAFRS RPWNEVEDRL
60 70 80 90 100
RAIVADPRVP RAIKRACTWS ALALSVQVAA RQQEELLYQV WWLQGHVEEC
110 120 130 140 150
QATSWALTSQ LQQLRLEHEE VATQLHLTQA ALQQVLNERD GLCGRLLEVE
160 170 180 190 200
RSMQVYPMPQ DFVPGPEAGQ YGPVAGTLNA EQSEAVATEA QGMPHSEAQV
210 220 230 240 250
AAPTAVYYMP EPQSGRVQGM QPLLLMQAPH PVPFHMPSPM GLPYSTPLPP
260 270 280 290 300
PVVMESAAAI APQMPPAGIY PPGLWATVGS QEETAPPWDQ KCHGQDGYPE
310 320 330 340 350
NFQGVYHPGD NRSCNQKEGS ECPQGMTSQG DSSSHSLKKD PVMQEGTAPP
360 370 380 390 400
EFSRSHSLEK KPVMPKEMVP LGDSNSHSLK KDPVVPKEIV PIGDSNSHSL
410 420 430 440 450
TKNPVVHKEM VSLGDSNSHS MKKDPVMPQK MVPLGDSNSH SLKKDPMMCQ
460 470 480 490 500
EMVPLGDSNS HSLKKDPVVA QGTAPLMYSR RHSQKKVPMM PKEMVPLGES
510 520 530 540 550
HSHSLKKDLV VPKELVPLGD SKSHRMKKDP VMPQKMVPLG DSRSHSLKKD
560 570 580 590 600
PVMPQNMIPL EDSNSHSLKK DPVMPQNMIP LEDSNSHSLK KDPMMHQEMV
610 620 630 640 650
PLGDSNSHSL KKDPVVPQDT APLMFSRRHS LKKVPVMPKE MVPLGDSHSL
660 670 680 690 700
KKDPVMPQNM VPLEDSNSHS LKKDPVVPQG TAPLMFSRRH SLKKVPVMPK
710 720 730 740 750
EMVPLGDSNS HSLKKDPVVP QGTAPLMFSR RHSLKKVPVM PKEMVPLGDS
760 770 780 790 800
HSLKKDPVMP QNMVPLEDSN SHSLKKDPVV PQGTAPLTFS RRHSLKKVPV
810 820 830 840 850
VPQGTASLGF SRIHSLKKEL VMPEEMVPLG DSNSHSMKKD LVMPKEMVPL
860 870 880 890 900
GDSNSHSLKK DPVVHQEVVS LGDSNSHSLK KHPVIPQGTA SLRFSKSHSQ
910 920 930 940 950
KEDQERPQVT PLEDSKSHGV KNSPWKHQPQ GQKVKEQKRK KASESQQQKP
960 970 980 990
ASCSSPVNWA CPWCNAMNFP RNKVCSKCKR VRMPVENGSV DPA
Length:993
Mass (Da):109,806
Last modified:October 14, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDF334702C1F9FF59
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL627231 Genomic DNA No translation available.
CH471107 Genomic DNA Translation: EAX11844.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS83488.1

NCBI Reference Sequences

More...
RefSeqi
NP_001182201.1, NM_001195272.1
XP_005262409.1, XM_005262352.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000632600; ENSP00000488022; ENSG00000282815

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
100129520

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:100129520

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627231 Genomic DNA No translation available.
CH471107 Genomic DNA Translation: EAX11844.1
CCDSiCCDS83488.1
RefSeqiNP_001182201.1, NM_001195272.1
XP_005262409.1, XM_005262352.3

3D structure databases

ProteinModelPortaliA0A0J9YWL9
SMRiA0A0J9YWL9
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiA0A0J9YWL9
PhosphoSitePlusiA0A0J9YWL9

Polymorphism and mutation databases

BioMutaiTEX13C

Proteomic databases

jPOSTiA0A0J9YWL9
PRIDEiA0A0J9YWL9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000632600; ENSP00000488022; ENSG00000282815
GeneIDi100129520
KEGGihsa:100129520

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
100129520
EuPathDBiHostDB:ENSG00000282815.1

GeneCards: human genes, protein and diseases

More...
GeneCardsi
TEX13C
HGNCiHGNC:52277 TEX13C
neXtProtiNX_A0A0J9YWL9

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

GeneTreeiENSGT00940000161768
OMAiKDPVMPQ
OrthoDBi671563at2759

Miscellaneous databases

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
100129520

Gene expression databases

BgeeiENSG00000282815 Expressed in 3 organ(s), highest expression level in right testis

Family and domain databases

InterProiView protein in InterPro
IPR028193 TEX13
IPR001876 Znf_RanBP2
PfamiView protein in Pfam
PF15186 TEX13, 1 hit
PROSITEiView protein in PROSITE
PS01358 ZF_RANBP2_1, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTX13C_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0J9YWL9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2016
Last sequence update: October 14, 2015
Last modified: January 16, 2019
This is version 23 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
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