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Protein
Submitted name:

Cytospin-B

Gene

Specc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cytospin-BImported
Gene namesi
Name:Specc1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2442356 Specc1

PTM / Processingi

Proteomic databases

PRIDEiA0A0J9YUR2

Expressioni

Gene expression databases

BgeeiENSMUSG00000042331 Expressed in 274 organ(s), highest expression level in blood
ExpressionAtlasiA0A0J9YUR2 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliA0A0J9YUR2
SMRiA0A0J9YUR2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini872 – 977Calponin-homology (CH)InterPro annotationAdd BLAST106

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili82 – 116Sequence analysisAdd BLAST35
Coiled coili145 – 179Sequence analysisAdd BLAST35
Coiled coili282 – 372Sequence analysisAdd BLAST91
Coiled coili400 – 434Sequence analysisAdd BLAST35
Coiled coili504 – 531Sequence analysisAdd BLAST28
Coiled coili571 – 598Sequence analysisAdd BLAST28
Coiled coili606 – 647Sequence analysisAdd BLAST42
Coiled coili666 – 693Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000118856

Family and domain databases

CDDicd00014 CH, 1 hit
Gene3Di1.10.418.10, 1 hit
InterProiView protein in InterPro
IPR001715 CH-domain
IPR036872 CH_dom_sf
PfamiView protein in Pfam
PF00307 CH, 1 hit
SMARTiView protein in SMART
SM00033 CH, 1 hit
SUPFAMiSSF47576 SSF47576, 1 hit
PROSITEiView protein in PROSITE
PS50021 CH, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

A0A0J9YUR2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGNHSAKLEE PETGTIPTTK RTGIPAPREL SVTISRERSV PRGPSSSKKL
60 70 80 90 100
GSSPTSSCNP TPTKHLRTTP AKPKQEHEGA EKAVLESQVR ELLAEAKTKD
110 120 130 140 150
SEINRLRSEL KKCKERWALS TEDANASDPS AEGTASPESD AQPLIRTLEE
160 170 180 190 200
KNKTFQKELA DLEEENRALK EKLTYLEQSP NSEGAASHTG DSSCPTSITH
210 220 230 240 250
ESSFGSPVGN ELSSETDEYR RTTHGSALRT SGSSSSDVTK ASLSPDASDF
260 270 280 290 300
EHITADTPSR PLSATSNPFK SSKGSPTGSS PNNASELSLA SLTEKIQKME
310 320 330 340 350
ENQHSTAEEL QATLQELSDQ QQMVQELTAE NEKLVDEKTI LETSFHQHRE
360 370 380 390 400
RAEQLSQENE KLINLLQERV KNEEPSAQGG KVLELEQKCT DILEKSRFER
410 420 430 440 450
EKLLNIQQQL TCSLRKVEEE NQGAIDMIKH LKEENEKLNG FLEHERCNNS
460 470 480 490 500
VMAKTLEECR VTLEGLKMEN GSLKALLEAD KQKAIEASST VGQTAENFEV
510 520 530 540 550
QEMLKVARAE KDQLQLSCTE LRQELLKANG EIKHVSSLLA KMEKDYSYLK
560 570 580 590 600
EVCDHQAEQL SRTSLKLQEK ASESDAEIKD MKETIFELED QVEQHRAVKL
610 620 630 640 650
HNNQLISELE GSVIKLEEQK SDLERQLKTL TKQIKEETEE WRRFQADLQT
660 670 680 690 700
AVVVANDIKC EAQQELRTVK RRLLEEEEKN ARLQKELGDI QGHSRPVNEE
710 720 730 740 750
PEPSEADAAG RWRGVYVNRT SPAPSDSATT VKSLIKSFDL GHSGGTGQSI
760 770 780 790 800
SVHKTPRSPL SGIPVRTAPA AAVSPMQRHS TYSSMKPASK GTSQRLDLPD
810 820 830 840 850
LPLSDLLKGR AEDRKSDPYL RKSPSLESLS RPPSLGFGNT RLLSASTGGL
860 870 880 890 900
KPSKLSVERR DPLAALAREY GGSKRNALLK WCQKKTEGYA NIDITNFSSS
910 920 930 940 950
WSDGLALCAL LHTYLPAHIP YQELNSQEKK RNLLLAFEAA QSVGINPSLE
960 970
LSEMLYTDRP DWQSVMQYVA QIYKYFET
Length:978
Mass (Da):108,844
Last modified:October 14, 2015 - v1
Checksum:iCB268DD055B26A9E
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q5SXY1CYTSB_MOUSE
Cytospin-B
Specc1 Cytsb, Kiaa4061
1,067Annotation score:
A0A0J9YTU3A0A0J9YTU3_MOUSE
Cytospin-B
Specc1
1,058Annotation score:
A0A0J9YUG8A0A0J9YUG8_MOUSE
Cytospin-B
Specc1
407Annotation score:
A0A0J9YUF8A0A0J9YUF8_MOUSE
Cytospin-B
Specc1
781Annotation score:
A0A0J9YV86A0A0J9YV86_MOUSE
Cytospin-B
Specc1
710Annotation score:
A0A0J9YV47A0A0J9YV47_MOUSE
Cytospin-B
Specc1
121Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592080 Genomic DNA No translation available.
AL596110 Genomic DNA No translation available.
AL646042 Genomic DNA No translation available.
BX284675 Genomic DNA No translation available.
RefSeqiNP_001025107.1, NM_001029936.3
UniGeneiMm.438022
Mm.458025
Mm.459461

Genome annotation databases

EnsembliENSMUST00000202179; ENSMUSP00000144300; ENSMUSG00000042331
GeneIDi432572
KEGGimmu:432572

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592080 Genomic DNA No translation available.
AL596110 Genomic DNA No translation available.
AL646042 Genomic DNA No translation available.
BX284675 Genomic DNA No translation available.
RefSeqiNP_001025107.1, NM_001029936.3
UniGeneiMm.438022
Mm.458025
Mm.459461

3D structure databases

ProteinModelPortaliA0A0J9YUR2
SMRiA0A0J9YUR2
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiA0A0J9YUR2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000202179; ENSMUSP00000144300; ENSMUSG00000042331
GeneIDi432572
KEGGimmu:432572

Organism-specific databases

CTDi92521
MGIiMGI:2442356 Specc1

Phylogenomic databases

GeneTreeiENSGT00760000118856

Miscellaneous databases

ChiTaRSiSpecc1 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000042331 Expressed in 274 organ(s), highest expression level in blood
ExpressionAtlasiA0A0J9YUR2 baseline and differential

Family and domain databases

CDDicd00014 CH, 1 hit
Gene3Di1.10.418.10, 1 hit
InterProiView protein in InterPro
IPR001715 CH-domain
IPR036872 CH_dom_sf
PfamiView protein in Pfam
PF00307 CH, 1 hit
SMARTiView protein in SMART
SM00033 CH, 1 hit
SUPFAMiSSF47576 SSF47576, 1 hit
PROSITEiView protein in PROSITE
PS50021 CH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A0J9YUR2_MOUSE
AccessioniPrimary (citable) accession number: A0A0J9YUR2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2015
Last sequence update: October 14, 2015
Last modified: September 12, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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