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Protein
Submitted name:

Cytospin-B

Gene

Specc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cytospin-BImported
Gene namesi
Name:Specc1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2442356 Specc1

Expressioni

Gene expression databases

BgeeiENSMUSG00000042331 Expressed in 274 organ(s), highest expression level in blood
ExpressionAtlasiA0A0J9YUF8 baseline and differential

Structurei

3D structure databases

SMRiA0A0J9YUF8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili162 – 196Sequence analysisAdd BLAST35
Coiled coili225 – 259Sequence analysisAdd BLAST35
Coiled coili362 – 452Sequence analysisAdd BLAST91
Coiled coili480 – 514Sequence analysisAdd BLAST35
Coiled coili584 – 611Sequence analysisAdd BLAST28
Coiled coili651 – 678Sequence analysisAdd BLAST28
Coiled coili686 – 727Sequence analysisAdd BLAST42
Coiled coili746 – 773Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000118856

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

A0A0J9YUF8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRSAAKPWSP VAKAGSHGPD RTRPLPGTPS GMKSSKSSTS LAFESRLSKL
60 70 80 90 100
KRASSEDTLN KPGSASSGVA RLKKTSTSGA ISELTESRLR SNTGTIPTTK
110 120 130 140 150
RTGIPAPREL SVTISRERSV PRGPSSSKKL GSSPTSSCNP TPTKHLRTTP
160 170 180 190 200
AKPKQEHEGA EKAVLESQVR ELLAEAKTKD SEINRLRSEL KKCKERWALS
210 220 230 240 250
TEDANASDPS AEGTASPESD AQPLIRTLEE KNKTFQKELA DLEEENRALK
260 270 280 290 300
EKLTYLEQSP NSEGAASHTG DSSCPTSITH ESSFGSPVGN ELSSETDEYR
310 320 330 340 350
RTTHGSALRT SGSSSSDVTK ASLSPDASDF EHITADTPSR PLSATSNPFK
360 370 380 390 400
SSKGSPTGSS PNNASELSLA SLTEKIQKME ENQHSTAEEL QATLQELSDQ
410 420 430 440 450
QQMVQELTAE NEKLVDEKTI LETSFHQHRE RAEQLSQENE KLINLLQERV
460 470 480 490 500
KNEEPSAQGG KVLELEQKCT DILEKSRFER EKLLNIQQQL TCSLRKVEEE
510 520 530 540 550
NQGAIDMIKH LKEENEKLNG FLEHERCNNS VMAKTLEECR VTLEGLKMEN
560 570 580 590 600
GSLKALLEAD KQKAIEASST VGQTAENFEV QEMLKVARAE KDQLQLSCTE
610 620 630 640 650
LRQELLKANG EIKHVSSLLA KMEKDYSYLK EVCDHQAEQL SRTSLKLQEK
660 670 680 690 700
ASESDAEIKD MKETIFELED QVEQHRAVKL HNNQLISELE GSVIKLEEQK
710 720 730 740 750
SDLERQLKTL TKQIKEETEE WRRFQADLQT AVVVANDIKC EAQQELRTVK
760 770 780
RRLLEEEEKN ARLQKELGDI QGHSSSMVSV S
Length:781
Mass (Da):86,679
Last modified:October 14, 2015 - v1
Checksum:iA88CEFC50FD0FD64
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q5SXY1CYTSB_MOUSE
Cytospin-B
Specc1 Cytsb, Kiaa4061
1,067Annotation score:
A0A0J9YUR2A0A0J9YUR2_MOUSE
Cytospin-B
Specc1
978Annotation score:
A0A0J9YTU3A0A0J9YTU3_MOUSE
Cytospin-B
Specc1
1,058Annotation score:
A0A0J9YUG8A0A0J9YUG8_MOUSE
Cytospin-B
Specc1
407Annotation score:
A0A0J9YV86A0A0J9YV86_MOUSE
Cytospin-B
Specc1
710Annotation score:
A0A0J9YV47A0A0J9YV47_MOUSE
Cytospin-B
Specc1
121Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592080 Genomic DNA No translation available.
AL596110 Genomic DNA No translation available.
AL646042 Genomic DNA No translation available.
BX284675 Genomic DNA No translation available.
RefSeqiNP_001297455.1, NM_001310526.1
UniGeneiMm.438022
Mm.458025
Mm.459461

Genome annotation databases

EnsembliENSMUST00000202178; ENSMUSP00000144161; ENSMUSG00000042331
GeneIDi432572

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592080 Genomic DNA No translation available.
AL596110 Genomic DNA No translation available.
AL646042 Genomic DNA No translation available.
BX284675 Genomic DNA No translation available.
RefSeqiNP_001297455.1, NM_001310526.1
UniGeneiMm.438022
Mm.458025
Mm.459461

3D structure databases

SMRiA0A0J9YUF8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000202178; ENSMUSP00000144161; ENSMUSG00000042331
GeneIDi432572

Organism-specific databases

CTDi92521
MGIiMGI:2442356 Specc1

Phylogenomic databases

GeneTreeiENSGT00760000118856

Miscellaneous databases

ChiTaRSiSpecc1 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000042331 Expressed in 274 organ(s), highest expression level in blood
ExpressionAtlasiA0A0J9YUF8 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA0A0J9YUF8_MOUSE
AccessioniPrimary (citable) accession number: A0A0J9YUF8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2015
Last sequence update: October 14, 2015
Last modified: September 12, 2018
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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