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UniProtKB - A0A0H3JV89 (A0A0H3JV89_STAAN)

Entry version 19 (02 Dec 2020)
Sequence version 1 (16 Sep 2015)
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Protein
Submitted name:

Transposase

Gene

tnp

Organism
Staphylococcus aureus (strain N315)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		SAUR158879:G1G21-1152-MONOMER
SAUR158879:G1G21-663-MONOMER
SAUR158879:G1G21-902-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
TransposaseImported
Submitted name:
Transposase for IS1181Imported
Submitted name:
Transposase for insertion sequence IS1181Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:tnpImported
Ordered Locus Names:SA0586Imported, SA0787Imported, SA1006Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStaphylococcus aureus (strain N315)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri158879 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Firmicutes › Bacilli › Bacillales › Staphylococcaceae › Staphylococcus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000751 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini43 – 91zf-ISL3InterPro annotationAdd BLAST49
Domaini163 – 416DDE_Tnp_ISL3InterPro annotationAdd BLAST254

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili249 – 269Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_041900_1_0_9

Identification of Orthologs from Complete Genome Data

More...OMAi		CKNCELY

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR002560, Transposase_DDE
IPR029261, Transposase_Znf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF01610, DDE_Tnp_ISL3, 1 hit
PF14690, zf-ISL3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0H3JV89-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCNDTLELLR IKDENIKYIN QEIDVIIKGK KATVVNAVLT YKPSACYCCG 
        60         70         80         90        100
VKNEGQIHKH GKRVSRITLL KTQGYNTYLN LAKQRFKCLE CNGTFTAKTS 
       110        120        130        140        150
IVDESCFISR CVTQKVIEEA TKVKTEIDTA EDNCISPSTV SRIRTKAANS 
       160        170        180        190        200
LRIKPFNCLP EHIAMDEFKS VKNVTGSMSF IFIDNDTHDV IDILENRTTR 
       210        220        230        240        250
FLRAYFERFD LKNRQQVKTV TIDMYEPYVR LFRDLFPNAA IIFDRFHIVQ 
       260        270        280        290        300
HLNRELNKYR VQVMNEYRNK KGPNYTIFKN NWKVLLMDTS KTIFSKYRWN 
       310        320        330        340        350
KSFKAYKRSS DIVEFMLSKD DILRRSYELV QGLRKDLRLC NWPKFINRLN 
       360        370        380        390        400
SVSKKSVSKG VWKVVKYYRK HQRMLRNTIY YPAFNNGAIE GINNKIKLIK 
       410        420        430 
RISFGYRNFN NFKARIMMIF SLYKGEKKKT TKPNNGLAA
Length:439
Mass (Da):51,571
Last modified:September 16, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5A2449D52098ACBF
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
BA000018 Genomic DNA Translation: BAB41596.1
BA000018 Genomic DNA Translation: BAB41818.1
BA000018 Genomic DNA Translation: BAB42026.1
BA000018 Genomic DNA Translation: BAB42257.1
BA000018 Genomic DNA Translation: BAB42809.1
BA000018 Genomic DNA Translation: BAB42946.1
BA000018 Genomic DNA Translation: BAB43167.1
BA000018 Genomic DNA Translation: BAB43592.1

NCBI Reference Sequences

More...RefSeqi		WP_001557163.1, NC_002745.2

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		BAB41596; BAB41596; BAB41596
BAB41818; BAB41818; BAB41818
BAB42026; BAB42026; BAB42026
BAB42257; BAB42257; BAB42257
BAB42809; BAB42809; BAB42809
BAB42946; BAB42946; BAB42946
BAB43167; BAB43167; BAB43167
BAB43592; BAB43592; BAB43592

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sau:SA0369
sau:SA0586
sau:SA0787
sau:SA1006
sau:SA1541
sau:SA1677
sau:SA1884
sau:SA2289

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000018 Genomic DNA Translation: BAB41596.1
BA000018 Genomic DNA Translation: BAB41818.1
BA000018 Genomic DNA Translation: BAB42026.1
BA000018 Genomic DNA Translation: BAB42257.1
BA000018 Genomic DNA Translation: BAB42809.1
BA000018 Genomic DNA Translation: BAB42946.1
BA000018 Genomic DNA Translation: BAB43167.1
BA000018 Genomic DNA Translation: BAB43592.1
RefSeqiWP_001557163.1, NC_002745.2

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiBAB41596; BAB41596; BAB41596
BAB41818; BAB41818; BAB41818
BAB42026; BAB42026; BAB42026
BAB42257; BAB42257; BAB42257
BAB42809; BAB42809; BAB42809
BAB42946; BAB42946; BAB42946
BAB43167; BAB43167; BAB43167
BAB43592; BAB43592; BAB43592
KEGGisau:SA0369
sau:SA0586
sau:SA0787
sau:SA1006
sau:SA1541
sau:SA1677
sau:SA1884
sau:SA2289

Phylogenomic databases

HOGENOMiCLU_041900_1_0_9
OMAiCKNCELY

Enzyme and pathway databases

BioCyciSAUR158879:G1G21-1152-MONOMER
SAUR158879:G1G21-663-MONOMER
SAUR158879:G1G21-902-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR002560, Transposase_DDE
IPR029261, Transposase_Znf
PfamiView protein in Pfam
PF01610, DDE_Tnp_ISL3, 1 hit
PF14690, zf-ISL3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0H3JV89_STAAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0H3JV89
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 16, 2015
Last sequence update: September 16, 2015
Last modified: December 2, 2020
This is version 19 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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