UniProtKB - A0A0H2ZZ26 (A0A0H2ZZ26_MYCA1)
Protein
RNA polymerase sigma factor
Gene
MAV_4171
Organism
Mycobacterium avium (strain 104)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- DNA-binding transcription factor activity Source: InterPro
- sigma factor activity Source: UniProtKB-KW
GO - Biological processi
- DNA-templated transcription, initiation Source: InterPro
Keywordsi
Molecular function | DNA-bindingUniRule annotationARBA annotation, Sigma factorUniRule annotation |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | MAVI243243:G1G7J-4074-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: RNA polymerase sigma factorUniRule annotation |
Gene namesi | Ordered Locus Names:MAV_4171Imported |
Organismi | Mycobacterium avium (strain 104)Imported |
Taxonomic identifieri | 243243 [NCBI] |
Taxonomic lineagei | Bacteria › Actinobacteria › Corynebacteriales › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC) › |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 89 – 151 | Sigma70_r2InterPro annotationAdd BLAST | 63 | |
Domaini | 192 – 243 | Sigma70_r4_2InterPro annotationAdd BLAST | 52 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 38 – 73 | DisorderedSequence analysisAdd BLAST | 36 |
Sequence similaritiesi
Phylogenomic databases
HOGENOMi | CLU_047691_1_1_11 |
OMAi | TYINLYR |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR039425, RNA_pol_sigma-70-like IPR014284, RNA_pol_sigma-70_dom IPR014293, RNA_pol_sigma70_actinobac IPR000838, RNA_pol_sigma70_ECF_CS IPR007627, RNA_pol_sigma70_r2 IPR013249, RNA_pol_sigma70_r4_t2 IPR013325, RNA_pol_sigma_r2 IPR013324, RNA_pol_sigma_r3/r4-like IPR036388, WH-like_DNA-bd_sf |
PANTHERi | PTHR43133, PTHR43133, 1 hit |
Pfami | View protein in Pfam PF04542, Sigma70_r2, 1 hit PF08281, Sigma70_r4_2, 1 hit |
SUPFAMi | SSF88659, SSF88659, 1 hit SSF88946, SSF88946, 1 hit |
TIGRFAMsi | TIGR02947, SigH_actino, 1 hit TIGR02937, sigma70-ECF, 1 hit |
PROSITEi | View protein in PROSITE PS01063, SIGMA70_ECF, 1 hit |
i Sequence
Sequence statusi: Complete.
A0A0H2ZZ26-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVSTATSLLG EEQLAGFLAS PGALSVLSGD TAAEGTGFIE MADSPDGPDG
60 70 80 90 100
VTSPEVPEAH AEPAAHEETR EETDAELTAR FERDAIPLLD QLYGGALRMT
110 120 130 140 150
RNPADAEDLL QETMVKAYAG FRSFRAGTNL KAWLYRILTN TYINSYRKKQ
160 170 180 190 200
RQPAEYPTEE ITDWQLASNA EHSSTGLRSA EVEALESLPD SEIKDALQAL
210 220 230 240 250
PEEFRMAVYY ADVEGFPYKE IAEIMDTPIG TVMSRLHRGR RQLRGLLADV
260
AKERGFNRGQ QTHEEVSS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000479 Genomic DNA Translation: ABK68002.1 |
Genome annotation databases
EnsemblBacteriai | ABK68002; ABK68002; MAV_4171 |
KEGGi | mav:MAV_4171 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000479 Genomic DNA Translation: ABK68002.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblBacteriai | ABK68002; ABK68002; MAV_4171 |
KEGGi | mav:MAV_4171 |
Phylogenomic databases
HOGENOMi | CLU_047691_1_1_11 |
OMAi | TYINLYR |
Enzyme and pathway databases
BioCyci | MAVI243243:G1G7J-4074-MONOMER |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR039425, RNA_pol_sigma-70-like IPR014284, RNA_pol_sigma-70_dom IPR014293, RNA_pol_sigma70_actinobac IPR000838, RNA_pol_sigma70_ECF_CS IPR007627, RNA_pol_sigma70_r2 IPR013249, RNA_pol_sigma70_r4_t2 IPR013325, RNA_pol_sigma_r2 IPR013324, RNA_pol_sigma_r3/r4-like IPR036388, WH-like_DNA-bd_sf |
PANTHERi | PTHR43133, PTHR43133, 1 hit |
Pfami | View protein in Pfam PF04542, Sigma70_r2, 1 hit PF08281, Sigma70_r4_2, 1 hit |
SUPFAMi | SSF88659, SSF88659, 1 hit SSF88946, SSF88946, 1 hit |
TIGRFAMsi | TIGR02947, SigH_actino, 1 hit TIGR02937, sigma70-ECF, 1 hit |
PROSITEi | View protein in PROSITE PS01063, SIGMA70_ECF, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A0H2ZZ26_MYCA1 | |
Accessioni | A0A0H2ZZ26Primary (citable) accession number: A0A0H2ZZ26 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | September 16, 2015 |
Last sequence update: | September 16, 2015 | |
Last modified: | December 2, 2020 | |
This is version 29 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |